Sphingopyxis sp. FD7: SPYCA_0811
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Entry
SPYCA_0811 CDS
T10393
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spfd03032
]
SPYCA_0811
03036 Chromosome and associated proteins [BR:
spfd03036
]
SPYCA_0811
03400 DNA repair and recombination proteins [BR:
spfd03400
]
SPYCA_0811
DNA replication proteins [BR:
spfd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPYCA_0811
Chromosome and associated proteins [BR:
spfd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SPYCA_0811
DNA repair and recombination proteins [BR:
spfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SPYCA_0811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BBB11553
UniProt:
A0A2Z5UKR9
LinkDB
All DBs
Position
complement(876798..877076)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIANENSDLRLEEVERIIDTFFDSIVDQLAVGGRVELRGFGAFSTRARESRT
GRNPRTGAAVEVKAKKVPYFKPGKEMRERLNS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcagaactggttcagaagatcgcgaacgaaaacagcgatttgaggctcgag
gaggtcgagcgtatcatcgacactttcttcgattccatcgtcgaccagctcgcggtcggc
ggtcgtgtggaactgcgcggcttcggcgccttttcgacacgcgcgcgcgagtcgcgcacc
ggccgcaacccgcgcaccggcgcggctgtcgaagtgaaggcgaaaaaggtgccctatttc
aaacccggcaaggaaatgcgcgagcggctgaacagctga
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integrated database retrieval system
