Sphingopyxis sp. FD7: SPYCA_0926
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Entry
SPYCA_0926 CDS
T10393
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spfd03036
]
SPYCA_0926
Chromosome and associated proteins [BR:
spfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCA_0926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBB11668
LinkDB
All DBs
Position
995169..999338
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AA seq
1389 aa
AA seq
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MASELAAGRALSRSDVTRIMTEHFGGSDALGRWSVRDAHAATELAQVQYLRAADQILLSA
SIDEAEQFFCSLDARLPTQTNRSDEQIEWQQFATPPRLAWLAARACALATGELVLEPSAG
TGMLAVWAAKAGSRLALNEISPLRRDCLNALFPAARVAGHDAELIDELLDPAITPSVVLM
NPPYSHGIERGHDSRTGSRHLRSAWNRLASGGRLFAIMPEWFDCARFLAGLKGPVSLRLN
AAVERAFVRQGTGITTRLLVFDKVDDSHEPVAIRTNDFRQLVDLVEALPARGSLEAVPEQ
SSLPARAPFRLVAAPRRPLPTPTRITPAASAIGSLTYQTLETPSPLAPQVGHYLPYRPSR
IVIDGAAEHPTPLVESVAMGSIAAPIPEAVPQLPDGMIAKGLLSAAQAETLIYAASAHAR
DLPGRFEPEDKGCSLKASAEGQTYRLGYFLGDGTGAGKGRQVASVILDRWVRGERRHIWI
SKNEALLEDARRDWAALGGLPIDIQPLASWKLGTPIAMRDGILFVTYPTLRSGRNDATRL
DQILAWAGDDFDGVIVFDEAHAMANAAGGEGSRGKVKGSEQGIAGVRLQNLLPRARVLYA
SATGASDVNNLAYATRLGLWGPETAFANREAFVADIRDGGIAAMELVARDLKSLGLYTAR
ALSFAGVEYEILEHRLSEDQIAVYDAYAEAWAIIHANLREALEATRIVDSETGGTLNSGA
KSAALSIFEGTKQRFFAQLLLSMKLPSLLPAIDAAIGEGNAVVVQLVSTAEAMLNRRLAD
LSDEEREALEIDLSPREYVIDYLAKSFPVRLMAVFTDENGNPRSEPMSDEQGAPVLCRSA
LAARNRMIEQLCALPPIATALDAIIERFGVDQVAEVTGRTRRLIIGGDGHQKLQSRSPRA
NVAETQAFMDGSKRILVFSDAGGTGRSYHADLAAKNQARRVHFLLEPGWRADAAIQGLGR
TNRTNQASAPLFKPVTTDVRGERRFISTIARRLDSLGALTRGQRQTGGQNLFDPADNLES
IYVKEALHRWFGLLFIGKLDAVSLGRFQDLTGLRIEAPDGSMVDDLPSIQRWLNRILALP
IALQNAIFDEFMGLVDARIDAARQAGTLDLGLETIAVEDFTVLSDTLLRTDPASGATTHL
LELEIARALKPLTLKRLEELYGLAGQRQQPVRNARSGRVGLLVPARSILADDGTRVSRFE
LLRPLKRSHITEDQLAESSWEGISVDAFREAWAAEVEEARTSHKRERLYLATGLLLPVWD
KLPSDFVRVSRISAADGRSLLGREVPVHCVPELCRALGLEREQALSADDIVQTVLATGRA
MEFIGREQLMVKRSLVNGSQRIELTGWSVARLDWYKAQGCFSEIIRYQTRLFVPIDGAAS
VVARLASSA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgagctggcggcaggccgcgcgctttcacgcagcgacgtcacgcgcatcatg
acagagcacttcggggggagcgatgctctcgggcgttggtcagttcgtgacgcccatgca
gccaccgagctggcacaggttcaatacctgcgagcagcggatcagattctgctctcggcg
tcgatcgacgaggcggaacagttcttctgctccctcgatgcccgactgccgacccagacc
aatcgcagcgacgagcagatcgaatggcagcagtttgcgacgccgccgcgccttgcctgg
cttgctgcccgagcttgcgcgctggccactggcgagcttgtgctggaaccctcggccgga
acgggcatgctcgcggtctgggccgccaaggccggctcgcgccttgccctcaacgaaatc
tcgccgctccgccgcgactgcctgaatgccctgttcccggctgcccgagtggccggtcat
gacgctgagctgatcgacgaactgcttgatcccgccatcaccccaagcgtcgtgttgatg
aaccctccctattcgcacggcatcgagcgagggcacgatagtcgcaccggctcgcgccac
ctgaggtcggcctggaaccgtctggcgtccggcggtcggcttttcgcaatcatgcccgaa
tggttcgattgcgcgaggtttctggcgggtctgaaggggccagtttcgctgcggctcaat
gccgccgtcgaacgcgcgttcgtcaggcagggcaccggcataaccacgcggctgttggtg
ttcgacaaggtggacgactcccatgagcctgtcgctatccgcacaaacgactttcgccag
ctggtcgatcttgtcgaggctctgccggctcgcggcagcttggaggctgttcccgagcaa
tcgagcctcccggctcgtgcgccgtttcgcctggtggccgcgccgcgcaggccactgccg
acaccgaccagaatcactcctgcagcatccgccatcgggtcgctcacgtaccagaccctc
gaaaccccttcgccgcttgcccctcaggtcggccactatctgccctatcgtccgagcaga
atcgtgatcgatggcgcggcggaacatccaacgccgctcgttgagtccgtcgccatgggg
tcgatcgccgcaccgattcccgaagctgtgccccagctgcccgacggaatgattgccaag
ggactgctgtcggccgcccaggcagagacactgatctacgcggctagcgcccatgcgcgc
gatctacccggtcggttcgagcccgaggacaagggctgttcgctcaaggcatctgcggaa
ggccagacgtaccgcctgggctatttcctcggggacggaacgggcgccgggaagggccgt
caggttgccagcgtcatcctcgatcgctgggtgcgcggggagcgccgccatatctggatc
tcgaagaacgaggcgctgctcgaagatgcccggcgcgactgggctgcgctgggtggcctc
ccgatcgacatccagccgctcgcatcctggaagctcggcacccccatcgccatgcgcgat
ggcattctcttcgtgacctacccgaccctgcggtcgggccgaaacgatgcgacccgcctc
gaccagatcctcgcctgggcgggtgatgacttcgacggcgtgatcgtgttcgacgaggcg
cacgccatggccaatgctgctggcggcgaaggatcgcgaggcaaggtcaagggatcggag
cagggtatcgctggcgtgcgcctgcagaacctcctgccgcgggcacgcgtgctctacgcc
tcggcaacaggtgcatcagacgtcaacaatctggcctatgccacgcgccttggcctgtgg
ggtccggagacagccttcgccaatcgcgaggcgttcgtcgccgacattcgtgacggcggg
atcgcagcgatggaactggttgcgcgggacctcaagtcgctcggcctctacaccgcgcgc
gcattgtccttcgccggcgtcgaatacgaaatcctcgagcatcgcctgagcgaggatcag
attgcggtctatgacgcctatgccgaggcctgggcgatcattcacgccaacctccgagaa
gcgctggaagccacgcggatcgtcgatagcgaaaccggcgggacgctcaattccggtgcc
aagtccgcagcgctctcgatcttcgagggaaccaagcagcgcttcttcgcgcagctgctt
ctgtcgatgaagctgcccagcctgttaccagctatcgacgcagcgattggcgaggggaac
gccgtggtcgtccagctggtctcgaccgcagaagccatgctcaatcgtcggcttgccgac
ctctctgatgaggagcgcgaagcgctggagatcgatctgtccccgcgggaatatgtgatc
gattacctcgccaagagctttcctgtccggctgatggcggtcttcaccgatgaaaacggc
aatcctcgctcagaaccgatgagcgatgagcaaggcgcgccagtactatgccgatcggca
ctcgccgcccgcaaccggatgatcgagcagctctgcgccttgccgcccatcgcgactgcg
cttgacgccatcatcgaacgcttcggcgtcgatcaggtggcggaagtgaccggccgtacg
cggcggctgatcattggcggcgatggccatcagaaactccaatcccgatcgccgcgcgcg
aacgtcgctgaaacccaggccttcatggatggcagcaagcgcatcctcgtcttttccgac
gccgggggaacggggcgcagctaccatgccgatctcgcagccaagaaccaggcccgccgc
gttcatttcctgctcgagccaggatggcgggctgacgccgcaatccaggggctcggacgg
accaatcgcaccaatcaggcatcagcgccgctattcaagccggtgacgaccgatgtccgc
ggcgagcgccgcttcatctcgacgatcgcgcggcggctcgacagcctcggggccctgacg
cgcgggcagcgccagaccggcggacagaacctgttcgatccggccgacaatctcgagagc
atctacgtcaaggaggcgctccaccgctggttcggcttgttgttcatcggcaagctcgat
gcggtcagcctcgggcgatttcaggacctgacaggcctcaggattgaagcacccgacggg
tcgatggtcgatgacctgccgtcgatccagcgctggctcaatcgcatcctcgcacttccc
atcgccttacagaacgcgatcttcgatgagttcatggggctggttgacgcgcggattgat
gccgcgcgtcaggccggcacgctcgatctcggccttgagaccatcgcggtcgaggacttc
acggtcctgtcggacacgctgctgcgcacggatccggcgtcgggcgcgaccacccatctg
ctggaactggaaatcgcccgggccctgaagccgctgacgctgaagaggctcgaagagctc
tacggcctcgccgggcaacggcagcaacctgttcggaacgcgcgttcaggccgggttggc
ttgctcgtacccgcccgcagcattcttgccgatgatggcacgcgcgtgtcccgcttcgaa
ttgctgcgtccgctgaagcgcagccacatcaccgaggatcagctggctgagagcagctgg
gagggaatctccgtcgacgctttccgcgaagcctgggcagccgaagttgaggaagcgcgg
accagccacaagcgcgagcgcctctatcttgcgacgggccttctgctgccggtctgggac
aagctcccgtccgatttcgtgagggtcagtcgcatatcggcagcggatggccgctcgctg
cttggccgggaggttccggtccattgcgttccggaactgtgccgggcgctgggtctcgaa
cgcgagcaagcgctgtcagccgacgacatcgtccagactgttctggcgactggccgagcc
atggaattcattggccgcgagcagctcatggtcaagcgcagtctggtcaatggctcacag
cgaattgaacttaccggatggagcgttgcccgccttgactggtacaaggcccaaggctgc
ttctcggaaatcatccgctaccagacgcggctgttcgtgccgatcgatggcgcggcgagc
gtggttgccagattggcatcatccgcatag
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