Sphingopyxis sp. FD7: SPYCA_1006
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Entry
SPYCA_1006 CDS
T10393
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_1006
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_1006
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
BBB11748
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Position
complement(1074553..1077042)
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AA seq
829 aa
AA seq
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MERRLGLVAAAIVLCLPMQAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKA
RVRSVRGRMPVDEAIRRLLAGTDAHAVRVSATSWRIERRPAPQRARAAPAPRQLPQPRAR
EPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGELAFGGERGMDSILSRTATVSS
THLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
QGTLYGAGSLGGIIRVVPKAPDPRGPTVQAIAGVALTQHGDPGGDIAGIANLPVGEDGHA
LRLVGYMITDGGYIDNPLRGQKDVNRTHIRGGRGTFRIEAGDGWAVDIGGIYQSITSDDA
QYADKDTAPLTRRSMIEQPAKTRYGLGTLVVMKDWGDLRFQSSNAFIDHRLSERFDASLP
HGGELDGAGPGAAVGMVDVRRLFAPIDITPSRDVPRRLEQHNVTRMFASENRIWRPYHDG
FGWVVGASFIANRARQDREYAYGMLRTPLPGVTNRVTEWTGFAEATRELLPGLVASGGLR
LSHVRLGGMAEDVPFALAEAERATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPG
GLAIDGNFVRRFRNDRVRTWEAGVRFGDRKQTLLDATLSVSHSRWQNIQADFIDSNGFPT
TANIGDGRITSLSGALAMRPTAALTFELGAVYNHSRVDDLSPEILPVFAAAPARLGRIPN
VASHAVRGSINYATNVGDEDFRINGWANYIGPSRLGIGPLLGESQGDYVDTGLAMRIGND
RRGLSLTLTNLFDSRGNRFSLGTPFVEGNAGFLTPLRPRTLRIAVDVAY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcgcctcggccttgtcgcagcagcgatcgtgctttgcctgccgatgcaggcg
aaagcagccgaagaacgcgccttcgacgtgcgcggcggcagcctgtcggccgttgtgccg
gtgatcagccgacagggcggcgtcagcatcagcgtcgccgatgcccggctgtggaaagcg
cgcgtccggtcggtgcgcgggcggatgcccgtcgacgaagcgatccgccgcctgctcgcc
ggaaccgatgcgcacgccgtccgcgtcagtgcgacgagctggcgcatcgaacgtcgcccg
gctccgcagcgcgcccgcgccgcgcccgcgccgcggcagctgcctcagccgcgcgcgcgc
gaacccgcgaacgaggtggttgccgccgcggccgatacgatcatcgtcaccgcgtcgaaa
accgaccttccctattcgcattttgccggtgtcgtcacccaactggatggcggcgaactg
gcgttcggcggcgagcgcgggatggattcgatcctgtcgcgcaccgccaccgtttcctcg
acccatctgggttcggggcgcaacaagctgttcattcgcggtatcgccgattcgagtttc
acggggccgacgcaggcgaccgtcggccagtatctgggcgatattcgcctcagctataac
gcccccgaccccgacctgcgcctctatgacatcgacaatgtcgaaatcctcgaagggcca
cagggcacgctctatggcgcggggtcgctcggcgggatcattcgcgtcgtcccgaaagcg
cccgatccgcgcggcccgacggttcaggcgatcgcgggcgtcgcgctgacccagcatggc
gatcccggcggcgatatcgcgggcattgcgaacctgccggttggcgaggacggccatgcg
ctgcgccttgtcggctatatgatcaccgatggcggctatatcgacaacccgctgcgcgga
cagaaggacgtcaaccgtacccatatccgcggcggccgcggcacctttcggatcgaggca
ggcgacggctgggcggtcgacatcggcggcatctatcagtcgatcacctccgacgacgcg
caatatgccgacaaggatacggcgccgctcacccgccgttcgatgatcgagcaaccggcg
aagacgcggtacggccttggaacgctcgtggtgatgaaggattggggcgatttgcgcttt
cagtcgtcgaacgcctttatcgaccaccggttgtccgaacgcttcgatgccagcctgccg
catggcggcgaactcgatggtgccggaccgggtgcggccgtcggcatggtcgacgtccgg
cgcctctttgcgccgatcgacatcaccccgtcgcgcgacgtgccgcggcggctcgaacaa
cataatgtgacgcggatgttcgccagcgaaaaccggatctggcgcccctatcatgacggg
ttcggctgggtcgtcggagcgagcttcatcgccaatcgcgcgcgtcaggaccgcgaatat
gcctatggaatgctccgcacgccgctgccaggcgtgaccaaccgcgtcaccgaatggacg
ggctttgccgaagcgaccagggaattgcttccgggcctcgtcgcctcgggcgggctgcgg
ctgtcgcatgtgcggcttggcggcatggccgaggatgtgcccttcgcgctcgccgaggcg
gagcgcgcgacgacggcgtcgcggcacgaaaccgacctcttgccctctgcttcgctgctc
gcgatgccgctcgacaatctgcgtctctacgcgcgctatcaggagggattccgccccggc
gggctggccatcgacggcaatttcgtgcggcgtttcaggaatgatcgggtccggacgtgg
gaagcgggcgtgcgcttcggcgaccggaagcagacgctgctcgacgcgaccctgtccgtc
tcgcacagccgctggcagaacatccaggccgatttcatcgacagcaacggctttccgacc
accgccaatatcggcgacggccgtatcaccagcctgtcgggggcgctcgcgatgcggccg
accgccgcgctgacctttgagctgggcgccgtctataaccacagccgcgtcgatgatctg
tcgccggagattctgcccgtttttgctgcggcgcccgcgcggctgggacgcattcccaat
gttgccagccatgccgtgcgcggctcgataaattatgccaccaacgtcggcgacgaggat
tttcgcatcaatggctgggccaattatatcggcccgtcccggctcggcattggcccgctg
ctcggcgaaagccagggcgattatgtcgatacggggcttgcgatgcgcatcggcaacgac
cgccgcggcctgtcgctgacgctcaccaacctgttcgattcgcggggcaatcgcttctcg
ctcggcacgccgttcgtcgagggcaatgcgggattcctgaccccgctgcgcccccgcacg
ctccgcatcgcggtggacgtggcttattag
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