Sphingopyxis sp. FD7: SPYCA_1009
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Entry
SPYCA_1009 CDS
T10393
Name
(GenBank) autotransporter beta-domain-containing protein
Organism
spfd Sphingopyxis sp. FD7
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GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
BBB11751
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All DBs
Position
complement(1078725..1081940)
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AA seq
1071 aa
AA seq
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MRKTLLASTCLATLISTAASAETTISTATTAPVRTSTIKSGAPDDIKVTSAGSIKPTVAG
PAVTIDSNHKVVNEGTIEFSNIDGATGILANAGMTGGITNSASGKITIGETYAATDIDND
GDLDGPFAIGSNRVGIATAGAFTGNIVNSGAIAIEGKDSAGIRLGGPLTGGFTNDGTISV
LGDRALGVGLQNVTGNVRLAGTIAATGVDAIAARLSGDISGALVVQGNLTATGYRFTTPP
ADPSKLDADDLLTGGSALAVEGDVTGGIILAVPPKDSSPTDKDEDKDGIDDDKEGSAAVR
AFGSAAAVRIGSADRDVAIGPVAGTGTGLGIIIDGSVLGNGLYAGKDGNAIQIGGLGGAV
TIAGGVGIGATGSVAAQSKDAAATAIRFGGGASTPELRNAGKIEATTGGNASGAVATAVI
VGAGADVALIRNSGTIAAKTGGDNGTARAIVDLSGNVDMVENSGAISASGAAATSDRNIA
IDLSANGAGATVRQTAVAADKTAPSIVGDVRFGSGNDVFDIADGSVKGDSFFGSGNNRFA
LSGDATYAGDARFGAGADTMALAGTAKFNGLADFGGGADTLTIGGTSVFSGTLANSSGLA
VSVSGGAFDVRGAATIASLAVTDKGVLGVMLDTGSTGTALQVTGNASFGAESKLALQLSS
IEEAEGEHIVLTAGSITGANNLTASQTLLPFLYKGTLTSTATQLIVDVERKSVNELGLNR
SEGRAFDAVLDAVVAEQKIEDVFLGITDGDQFRAQLQQMLPEHEGGVFETVTSGSRALAR
HLLDPNAPYQDEGKWGYWVNQAVWGTSKGIGNTASYDVSGWGISLGAEIESDVGNFGGSI
AFLSGKDSNGSNANEVSTSQFEGALHWRLRSDGFMAHARVSGAPVKLKGTRIFRAEAGAE
DIEETMKGKWDATLWSASGSVAYDTRVGGLTLRPMVAVDYYKLQEDGYQETGGGDALDLT
VLDRDSDELAVTGTVTLGLEFGGADEYDGWTRFELEGGRRQIVSGTLGATTASFKDGTPF
TLIPDDRTSGWVGRLRGIAGNSAFQVAGELSAEEQQSHVGWAFRASLRVGL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaccttgctggcctccacctgtctggccacccttatctcgaccgccgcctcc
gccgaaacgacgatcagcaccgcgacgacggcgccggtgcggacgtcgacgatcaagtcg
ggggcgcccgacgacatcaaggtcacctcggccgggtcgatcaagcccacggtcgccggc
cctgccgtcacgatcgacagcaatcacaaggtcgtcaacgaaggcacgatcgagttcagc
aatatcgatggcgcgaccggcatcctggcgaatgcgggcatgaccggcggcatcaccaac
agcgcgtcgggcaagatcacgatcggtgaaacctatgccgcgaccgacatcgacaatgac
ggcgacctcgacgggccgttcgcgattggcagcaatcgcgtcggcatcgcgaccgcgggc
gcctttaccggcaacatcgtcaattcgggcgcgatcgcgatcgagggcaaggattcggcg
ggcataaggctcggcggcccgctgacgggcggcttcaccaatgacggtacgatcagcgtg
ctgggcgaccgcgcgctgggcgtcgggcttcagaacgtcaccggcaacgttcgtctcgcc
ggcacgatcgccgccaccggcgtcgatgcgatcgccgcgcggctcagcggcgacattagc
ggcgcgctcgtcgtgcagggcaatcttacggcgaccggctatcgcttcaccacgccgccc
gccgatccctcgaagcttgatgccgacgacctgctgaccggcggctccgcgctggcggtc
gaaggcgatgtgacgggcggcatcattctcgcggttccgcccaaggattcgagcccgacc
gacaaggatgaggacaaggacggcatcgacgacgacaaggaaggatcggcagcggtccgc
gcctttggatcggcagcagccgttcggatcggctctgccgaccgggatgtcgcgattggc
cccgttgcgggaacgggcaccgggctgggcatcatcatcgacggttcggtgctcggcaac
gggctctacgcgggcaaggacggcaacgcgatccagatcggcgggcttggcggcgcggtg
accatcgccggcggcgtcggcatcggcgcgaccggcagcgtcgcggcgcaatcgaaggac
gccgcggcgacggcaatccgcttcggcggcggcgcttcgacccccgaactgcgcaatgca
ggcaagatcgaggcgaccaccggcggcaatgcgtcgggcgccgtagcgaccgcggtgatc
gtcggagcgggcgccgatgtcgcgctgatccgcaacagcggcacaatcgcggccaagacc
ggcggcgacaatggcaccgcgcgcgccatcgtcgacctgtcgggcaatgtcgatatggtc
gagaacagcggcgcgatcagcgcgagcggcgcggccgccacctccgaccgcaatatcgcg
atcgacctgtcggcgaacggcgcgggcgcgacggtcaggcagaccgcggttgcagccgac
aaaaccgcccccagcatcgttggcgacgtgcgctttggcagcggaaacgatgttttcgac
atcgccgacgggtcggtgaagggcgacagctttttcggctccggcaacaaccgtttcgcg
ctgtcgggcgacgctacctatgccggcgacgcgcgtttcggcgcaggcgccgacacgatg
gcgctggctgggacggcgaagttcaacgggctggcggacttcggcggcggcgccgatacg
ctgacgatcggcggcacctcggtattttccggcacgcttgccaattcgtcgggactggcc
gtgtcggtcagcggcggcgcgttcgatgtgcgcggcgccgcgacgatcgcatcgctcgcc
gtgaccgacaagggcgtgctcggcgtcatgctcgacacaggcagcacgggcaccgcactg
caagtgaccggaaacgccagcttcggcgccgaatcgaagctcgcgcttcaattgtcgagc
atcgaggaagccgagggcgagcatatcgtgctcaccgccgggtccatcaccggcgccaat
aatctgaccgcgtcgcagacactccttcccttcctttacaagggcacgctcacatcaacg
gccacccagctgatcgtcgatgtcgagcgcaagagcgtgaacgagcttggcctcaaccgc
tcggaagggcgtgctttcgacgctgtgctcgacgcggtcgtcgccgaacagaagatcgaa
gacgtcttcctcggcattacggacggcgatcagttccgcgcccagcttcagcagatgctg
cccgaacatgaaggcggcgtctttgaaaccgtcacctcgggttcgcgcgcgctcgcccgc
caccttctcgaccccaatgcaccgtatcaggacgagggcaaatggggctattgggtcaat
caggcggtgtggggcacgtcgaagggcatcggcaacaccgccagctatgacgtcagcggc
tggggcatttcgctcggcgccgaaatcgagagcgatgtcggcaatttcggcggctcgatc
gcctttctcagtggcaaggacagcaatggcagcaacgccaatgaggtgagcacgagccag
tttgaaggcgcgctgcactggcgcctgcgctccgacggcttcatggcgcacgcccgcgtg
tcgggcgccccggtgaagctcaagggcacgcgtatcttccgcgccgaagcaggcgccgag
gatattgaggaaacgatgaagggcaagtgggacgcaaccttgtggtcggcgtcgggctcg
gtcgcctatgatacgcgcgtcggcgggctgacgctgcgtccgatggtcgccgtcgattat
tacaagcttcaggaagacggctatcaggaaacgggtggcggcgacgcgctcgacctcacc
gtgctcgatcgcgacagcgacgagctggcggtgacgggcacggtgacgctcggcctcgag
ttcggcggcgccgacgaatatgacggctggacacgcttcgagctcgaaggcgggcgccgt
cagatcgtcagcggcacgctgggcgcgacgactgcctcgttcaaggatggcacgcccttc
accctgattcccgatgatcgcacgagcggctgggtcggccgccttcgcggcatcgccggc
aattcggcctttcaggtcgccggcgaactgtcagcggaagaacagcaaagccatgtcggc
tgggcgttccgtgcgagcctgcgggtcggtctctag
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