Sphingopyxis sp. FD7: SPYCA_1091
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Entry
SPYCA_1091 CDS
T10393
Name
(GenBank) (uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spfd03009
]
SPYCA_1091
Enzymes [BR:
spfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SPYCA_1091
Ribosome biogenesis [BR:
spfd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPYCA_1091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
PSD5
Motif
Other DBs
NCBI-ProteinID:
BBB11833
UniProt:
A0A2Z5ULI7
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Position
1170090..1171289
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AA seq
399 aa
AA seq
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MGEAALIERIAARGDGVTGDGRHVAGGVPGDRVRDDGILIPGPNRAEPPCRHFGKCGGCQ
LQHVAEPALADFVRDRVVGGLAGQGVPFGDVLPALLSPPQSRRRAALTALRSGKQVAIGF
NAAQSNQIVDMRMCPLLAPELFALVAPVRDLLVMIAQPRRPVKVKLQLLDQGVELILEGV
KAEGLDAAMALQDFAGAHHLARFAIDQGDGLEILWQPDPPTVRFGDIAVEVPPFAFLQPT
AAGQAALVDAVAGAIGDAPAVADLFAGVGTFALSVQAGRKVYAAEGARDAIAALAGAANR
ARALVATEHRDLFRRPLVPAELNRFGAVILDPPRAGAEEQVKQLAASVTPVIAYVSCNPA
SFARDAKILVESGYRLDWVQPVGQFRWSTHVELAARFSK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagcagcgctgatcgagcgcattgccgcgcgcggggacggcgtcacgggcgac
ggccgccacgtggcgggcggcgttccgggcgaccgcgtgcgcgacgacggcatcctcatt
ccgggaccgaaccgcgccgagcccccgtgccgccatttcggcaaatgcggcgggtgccag
ttgcagcatgttgcggagcctgcgctggccgacttcgtgcgcgaccgcgtcgttggcggt
ctggcggggcagggggtgccctttggcgacgttctgcccgcgctgctgtcgccgccgcag
agccgccgccgcgcggcgctgaccgcgcttcggagcggaaagcaggtcgcgatcgggttc
aacgccgcgcagagtaaccagatcgtcgatatgcggatgtgcccgctacttgcccctgag
ttgttcgcgctggtcgcgccggtccgcgacctgctggtgatgatcgcgcagccgcggcga
cctgtgaaggtcaagctgcaactgctcgatcagggcgtcgaattgatattggagggcgtg
aaggccgaaggactcgatgccgccatggcgctgcaggatttcgccggtgcgcaccatctc
gcgcgctttgcgatcgatcagggcgacgggctcgaaatcctgtggcagcccgatccgccg
acggttcgttttggcgacatcgcggtcgaagtcccgcccttcgcctttctgcaaccgacg
gcggcggggcaggcggcgctcgtcgatgcggtcgccggggccatcggcgacgcgcccgcg
gtggccgaccttttcgccggggtcggcacctttgcgctgtcggtgcaggcggggcgcaaa
gtctatgcggccgaaggcgcgcgtgatgcgatcgcggcgctggcgggggccgccaatcgg
gcccgtgcgctcgtcgcaaccgagcatcgcgacctgttccgtcgcccgctggttcccgcc
gagctcaatcggttcggcgcggtcatcctcgacccgccgcgcgcgggcgcggaggagcag
gtgaaacagcttgcggcgtcagtgacgccggtgatcgcctatgtcagctgcaatcccgca
agctttgcgcgcgatgcgaaaatcctcgtcgagagcgggtacaggctcgattgggtgcag
cccgtcggccagttccgctggtcgacccatgttgaactggccgcgcggttctcgaaatag
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