KEGG   Sphingopyxis sp. FD7: SPYCA_1114
Entry
SPYCA_1114        CDS       T10393                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
spfd  Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:spfd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPYCA_1114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spfd03019]
    SPYCA_1114
   03009 Ribosome biogenesis [BR:spfd03009]
    SPYCA_1114
   03036 Chromosome and associated proteins [BR:spfd03036]
    SPYCA_1114
Enzymes [BR:spfd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SPYCA_1114
Messenger RNA biogenesis [BR:spfd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SPYCA_1114
Ribosome biogenesis [BR:spfd03009]
 Eukaryotic type
  90S particles
   RNase
    SPYCA_1114
 Prokaryotic type
  rRNA processing factors
   SPYCA_1114
Chromosome and associated proteins [BR:spfd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SPYCA_1114
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: BBB11856
LinkDB
Position
complement(1194490..1195170)
AA seq 226 aa
MSDPLDTRALAEIIGCTPDDPTLYDLALTHGSTGRADYQRLEFLGDRVLGLVLASELYTR
FPAASEGEMSSRLHVLASGATCAAIAQRLDLPSLIRFGAQARSDGGRYSDNIAADAIEAL
IGALYLDRGIDAARAFILAEWGAMIDGQQAAPKHPKAALQEWALARGRRPPEYEIVSREG
PDHAPRFRVAVRVGKLARAEAEGASKQAAEKAAAAALLAELEGQEK
NT seq 681 nt   +upstreamnt  +downstreamnt
ttgagcgaccctctcgacaccagggcgctcgccgagatcatcggctgcaccccggacgac
cctacgctttacgaccttgcgctgacgcacggcagcaccgggcgcgccgattatcagcgg
ctggagtttctgggcgaccgcgtgctggggctggtgctggcatccgaactctacacgcgc
tttccggccgcgagcgagggtgagatgtcgtcgcggctgcatgtgctggcatcgggcgcg
acctgcgccgcgatcgcgcagcggctcgatctgccgtcgctcatccgcttcggcgcgcag
gcgcggagcgatggcggccgctacagcgacaatatcgccgccgacgcgatcgaggcgctg
atcggcgcgctgtatctcgaccggggcatcgacgcggcgcgcgccttcatcctcgccgag
tggggcgcaatgatcgacgggcagcaggccgcaccgaagcatccgaaagccgcgctccag
gaatgggcgctcgcgcgcggtcgccgcccgcccgaatatgagatcgtgtcgcgcgaaggc
cccgaccacgccccgcgcttccgcgtcgccgttcgcgtcggcaagctggcgcgcgccgaa
gccgagggcgcgagcaaacaggccgccgaaaaggcagcggcggcggcgctgctcgccgaa
ctcgaaggacaggaaaaatga

DBGET integrated database retrieval system