Sphingopyxis sp. FD7: SPYCA_1409
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Entry
SPYCA_1409 CDS
T10393
Name
(GenBank) putative TonB dependent receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_1409
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_1409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
LpqB_N
Mito_carr
Motif
Other DBs
NCBI-ProteinID:
BBB12151
LinkDB
All DBs
Position
complement(1498057..1500822)
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AA seq
921 aa
AA seq
DB search
MAQEAPAGAGPEEDDAIIVTGIRETIQNSINTKREETAIVDALSSDDIGDIPAISVGQAI
QTITGATTHREKGDASEIALRGLGPFLSNSTFNGRDATNGSGDRSVNFNQFPSELVNNIK
IYKTQQASLVEGGVAGTIEIGTLRPLDFGKRRIQAEVKAQYNPYGDRIVGSGGIGWRGTL
SYVDQFANDTIGIAIGVQRNDTNNPEETYAASTTWTACRADIVVTNNNCTEYGRDDYGEG
HPFYLVPNAYTFRQISETDKRDAIFGAIQWRPSDQFNINLDVQYSDRTFVESRRDLNISE
ARRSLTNVVYDENGIVQSLSGQSAIESNGSELSRAEEYLGGGLSIEWQPSDRLTLIIDGS
YSRTIRVEDERNVRLRTDPTDVNGVRTVFNNMRIPYTYEIAPGSFVPTITIDPRFDLNNH
DLFWDDARFRRDQSRRHNKIIAGRFDAGYEMDGFFSKLSAGVRWSEMTFRDYDVRNGDFN
LNPPIAEDRRINNLCRNRAFPQTDFLSAADGNAITSWATFDVDCLFREYMGSEDPGALED
KRSPANRDVTERTLAGYIMADYDVDLGSFPVRGNIGVRVVKTDVTSNGLRSEFVLVDNGD
GTFRLETTDDFETVTIKSRSTRILPSVNAIFEVAPNTLLRVAGYRAMSRPAPSALGAGRT
FTLDDGGSFTNIEDAIDNVRANGSPRLKPLMSWNADAAIEWYPNKDSILSATLYYKQFNG
GFQPVVFDEQFVIDGQTVTVPVTQTRNSPDKSRIYGLELTAATRFSFLPKPLDGLGAKVS
YNYADSNFENEDVRLGDQFDPVTETVSEGIIPPASLSGYSKHVLSAQAYYEIGPVSLQAI
YNYRSKYYQDFVGGNSQLRFVGPSETVDFRASLDLMKGVSLRFEALNIFNEPKATYMPIY
GSSRQYHYYGSKYFIGIRARI
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaagcgcccgcgggggccgggccggaggaggatgacgcgatcatcgtcacc
gggattcgcgagacgatccagaattcaattaacaccaagcgggaggaaacggcgatcgtc
gatgcgctgtcgtcggacgacatcggcgacattccggcgatctcggtcgggcaggcgatc
cagacgatcaccggcgcgacgacgcaccgcgaaaagggcgacgcgtccgaaatcgcgctg
cgcggcctcggcccctttctgtccaattcgaccttcaacggccgcgacgcgacgaacggc
agcggcgaccgctcggtcaatttcaaccagttcccctccgaactcgtcaacaatatcaag
atatacaagacgcagcaggcgagccttgtcgaaggcggcgtcgcgggcacgatcgagatc
ggaacgctccgcccgctcgatttcggcaagcgccgcatccaggccgaggtcaaggcgcag
tataatccctatggcgaccgcatcgtcgggtcggggggcatcggctggcgcggaacgctg
agctatgtcgaccagttcgcgaacgacacgatcggcatcgcgatcggcgtgcagcgcaac
gacaccaacaatcccgaagaaacctatgccgcgtcgacgacctggacggcgtgccgtgcg
gacatcgtcgtgaccaacaataattgcaccgagtatggccgcgacgattatggcgaaggc
catcccttctacctcgtccccaacgcctataccttccgccagatcagcgagaccgacaag
cgcgacgcgatcttcggcgcgatccagtggcggccgtcggaccagttcaacatcaatctc
gacgtccaatattcggaccgcacctttgtcgagagccgccgcgacctcaacatctccgaa
gcacgccgcagcctgaccaacgtcgtttatgatgaaaacggcatcgttcagagcctgagc
gggcagagcgcgatcgaatcgaacgggtccgaactgtcgcgcgccgaggaatatctgggt
ggcggcctgtcgatcgaatggcagcccagcgaccggctgacgctcatcatcgacggcagc
tattcgcgcacgatccgcgtcgaggatgaacgcaacgtccgcctgcgcaccgacccgacg
gacgtcaacggcgtgcgcaccgtgttcaacaacatgcgcattccctatacatatgagatc
gcgccgggcagcttcgtgccgacgatcacgatcgatccgcgttttgacctcaacaaccac
gatttattctgggacgatgcgcgcttccgccgcgaccagagccgccgccacaacaagatc
atcgccggccgcttcgacgcgggttatgaaatggacggttttttcagcaagctctcggcg
ggcgtgcgctggtccgaaatgaccttccgcgactatgatgtgcgcaacggcgacttcaac
ctgaacccgccgatcgccgaggaccggcgcatcaacaatctctgccgcaaccgcgccttt
ccgcagacggacttcctgtcggcggccgacggcaacgccatcaccagctgggcgaccttc
gacgtcgattgcctgtttcgcgaatatatggggagcgaggatccgggcgcgctcgaggac
aaaaggtcgcctgcgaaccgcgacgtcaccgaacgcacgctcgcgggctatatcatggcc
gactacgacgtcgatctcggcagcttccccgtccgcggcaatatcggcgtgcgtgtcgtc
aagaccgacgtgacctcgaacggcctgcgcagcgagttcgtccttgtcgacaatggcgac
ggcaccttccgcctcgaaaccaccgacgatttcgaaacagtaacgatcaagagccgcagc
acgcgcatcctgcccagcgtcaacgcgatcttcgaggttgcgccgaacacgctgctgcgc
gtcgcgggttatcgcgccatgtcgcggcccgctcccagcgcgctcggcgcggggcgcacc
ttcacgctcgacgacggcggcagtttcaccaatatcgaggacgcgatcgacaatgtccgc
gccaacggcagcccgcgtctgaaaccactgatgtcgtggaacgccgacgcggcgatcgaa
tggtatccgaacaaggacagcattctgtcggctacgctctattacaagcagttcaacggc
ggtttccagccggtcgtgttcgacgaacaattcgtcatcgacgggcagacggtgacggtg
ccggtgacgcagacgcgcaacagccccgacaagtcgcgcatctatggcctcgaactcact
gcggcgacgcgcttcagcttcctgcccaagccgctcgacgggctgggcgcaaaggtcagc
tacaattatgccgattcgaacttcgagaatgaggacgtccggctcggcgaccagttcgat
ccggtgaccgagaccgtgtcagaaggtatcatccccccggccagcctgtcaggctattcc
aaacatgtgctgtcggcgcaggcctattatgagatcggcccggtgtcgctgcaggcgatc
tataactaccgctcgaaatattatcaggatttcgtcggtggcaacagccagcttcgcttt
gtcggacccagcgagaccgtcgatttccgcgcctcgcttgacctgatgaagggcgtgtcg
ctgcgcttcgaggcgctcaacatcttcaacgaacccaaggcgacctatatgcccatctat
ggcagcagccgccaatatcattattacggctcgaaatatttcatcggaatccgggcgcgg
atctga
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