Sphingopyxis sp. FD7: SPYCA_1413
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Entry
SPYCA_1413 CDS
T10393
Name
(GenBank) alginate lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SPYCA_1413
Enzymes [BR:
spfd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
SPYCA_1413
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Paralog
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
BBB12155
LinkDB
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Position
complement(1503922..1506096)
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AA seq
724 aa
AA seq
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MIAFPSRAAALLLTAAAMPAGPAMAATPSAASAQAFAPLFASEVEHARRTVDTSIRAGIN
VPVPRDPGGGFTHEQHKRNYRVIFEGGQLFRLTGEARYRDHVRDLLLAYADLYPALGPHP
AKANQTAGRLFWQSLNDSVFLVNAAQGYAAIRGSLSAADRQRIDDDVIRPMARFLSDESP
EVINRIHNHATWAAAGVGLSGYLLGDRDLVDKALLGLDKSGKAGFLRQLDLLFSPDGYYA
EGPYYQRYALQPFVVFAAAIAANDPDRRIFDYRDGIVLKAVRTAIDLTHDGYFLPVNDAM
PDKSLRTEELYHAVAIAYAATKDPAFLSIADWQDRTVLTPAGQALAADLAAGKAKPWSFG
SRLLSDGPDGKGGALVLLRSKPDPKGPLLVAKNTVQGMGHGHFDRLGWVYYDETGAVVTD
YGAARFLNVEAKRGGRYLPENDSWASATIAHNTLVVDEQSHFGGDWKVGERHGTRQLAAS
LGGPTRYAIGEIDSAYKGVTMRRALLLIEVDGLANPLSLDILHGTGGGRHVYDLPLHFSG
HIIDSDIAFARNLAERPVLGKANGYQHLWVDGEGTGTGKARLTWMQGSRFYSYHMAPPAG
ARFILAESGANDPEFNLRREPALIQRVDGAATATFVNLLEPHGAYDASAETVVASSARVT
GLEHRRVKGLDLVLVTLVDGRRIAIAVAEDVTPNAQHSVTVDGRILAWTGPVGRLDIAAT
GAKK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcatttccgtcccgggcggccgcgctgctcctcactgccgccgcgatgccagcc
ggtcccgcgatggcggcgacgccgtccgcggcctcggcgcaggcctttgccccactgttc
gcttcggaggtcgagcacgcgcgccgcaccgtcgatacctcgatccgcgcaggcatcaac
gtgcccgtgcccagggatcccggcggcggcttcacccacgaacagcataagcgcaattat
cgcgtcattttcgagggcggccagctgttccgcctgaccggcgaggcgcgctaccgcgat
catgtccgcgatcttctgcttgcctatgccgatctttatccggcgctcggtccgcacccc
gcaaaggcgaaccagaccgcggggcggctgttctggcaaagcctcaacgacagcgtgttc
ctcgtcaatgcggcgcagggctatgcggcgatccgcgggtcgctgtccgccgccgaccgc
cagcggatcgacgacgatgtgatccgcccgatggcacgcttcctgtccgacgagtcgcct
gaggtcatcaaccgcatccacaatcatgcgacgtgggcggcggccggggtcggcctgtcg
ggctatctgctcggcgaccgcgaccttgtcgacaaggcgctgctcgggctcgacaaaagc
ggcaaggcggggttcctgcgtcagctcgacttgctcttctcgcccgacggctattatgcc
gaaggcccctattatcagcgttatgcgctccagcccttcgtcgtttttgccgcggcgatc
gccgcgaacgatcccgaccgcaggattttcgactatcgggacggcatcgtcctgaaggcc
gtgcgcaccgcgatcgacctgacccacgacggatatttcctgccggtcaacgacgcgatg
cccgacaagagcctgcgcaccgaggaactctatcacgccgtcgccattgcctatgcggcg
acgaaagatcccgcctttctgtcgatcgccgactggcaggaccgcaccgtgctgaccccc
gcggggcaggcgctggcggcggacctggccgcgggcaaggcgaagccctggtccttcggc
tcgcggctgctctccgacggtcccgacggcaagggcggcgcgcttgtcctgctgcgcagc
aagcccgatcccaagggcccgctgctcgtcgccaaaaataccgtgcaggggatgggtcat
ggccatttcgaccgcctcggctgggtctattatgacgaaaccggcgcggtggtgacggac
tatggcgccgcgcgcttcctgaatgtcgaggcgaagcgcggcgggcgctacctgcccgaa
aacgacagctgggcgagcgcgacgatcgcgcacaatacgctcgtcgtcgacgaacaaagc
catttcggcggcgactggaaagtcggcgaacggcatggtacgcgccagcttgccgcgtcg
ctgggcggccccacccgctatgcgatcggcgagatcgacagcgcgtacaagggcgtgacg
atgcgccgcgcgctgctgctgatcgaagtcgacggtctcgcaaatccgctttcgctcgat
atcctccacggaactggcggcggcaggcatgtctatgacctgccgctgcatttttcgggg
catatcatcgacagcgacatcgcctttgcccgcaatctcgccgaacgaccggtgctgggc
aaggcgaacggctatcagcatctgtgggtcgacggcgaaggcaccgggacgggcaaggcg
cggctgacatggatgcagggcagccgtttctattcctatcatatggcaccgcccgcgggc
gcgcgcttcatccttgccgaaagcggcgcgaacgatcccgagttcaacctgcgccgcgaa
cccgcgctgatccagcgtgtcgatggcgcggcgaccgcgaccttcgtgaacttgcttgag
ccgcacggcgcctatgacgcgtcggccgagacggtcgtggcaagcagcgcgcgcgtgaca
gggctcgagcatcgccgcgtaaagggcctcgatctggtgctcgtcacgctcgtcgacggc
cgtcgcatcgcgatcgcggttgccgaagatgtcaccccgaacgcgcagcacagcgtcacc
gttgatggccgcattcttgcatggaccggcccggtcggccgcctcgacatcgccgcaacc
ggagcgaaaaaatga
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