Sphingopyxis sp. FD7: SPYCA_1438
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Entry
SPYCA_1438 CDS
T10393
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_1438
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
BBB12180
UniProt:
A0A2Z5UMP2
LinkDB
All DBs
Position
complement(1528118..1532341)
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AA seq
1407 aa
AA seq
DB search
MADDLPATETAPVAARNWPRAILRGAGYALLGLILLFALFLIGLNSDAGRRFVVTQIEKY
EFENGMKIGIGRLDGSLYSRMIVRDFTLSDPKGVFLRSPELRIDWRPLRYLASHIDIRSA
TAETLVMEKLPTFRPVPDTGEPLLPDLDIDVGRLRVDRFIFEPAVAGERQVATLNGRVAI
ADRRAQISANAETIGGGGKGDTLKLLLDAVPETNRLAMTLDMSAPAGGVLATMGGFEETL
TAKLDGRGDWKAWNGNLTANLGAAPLARIALRARDGNFAAKGNAQPSRLLSGPMAELLAP
ETAIDVKARLAGRKAVLDGRLTSSAADLGISGGVDLGANRFEELALAVNIRRPGAIAPAL
RASGLRATATFDGAFARPKVDYQANAANLAVNDIIIDRLSLAGKARVDAEQILIPVAGRA
ARIRGLDTVAGGTLADVRLDGDLAYADGRILSDNLRLRSPRIDARAIVVADLGRGFYTGA
IDGRVNDYRIESVGIFDIDTDADLKTAPRGGFEIAGRVRARSTRLFNSGVRDVLGGNATV
ISDVRYGTDGVVRFSGLRLTAPRLRVTGGQGSYAPGGQIRLAARATSTDYGPLGVELAGT
ISDPRAVVTADRPGLGIGLANLVARVTGAPKGYRLAATGDTDYGPLAADVVLLTAAGPLT
IDVERGDLSGIGFSGRLVQSDAGPFTGQLDASGQGLGGLVRLTAAGAHQAAAINVRANNV
VLPGPARLAVGSAVVDADVTLYETPHIVADIQVADTQIRDYDIAVARVKIDYRAGSGKAQ
ALIEGVSGVPFRIAANADLKPDLWRASVQGRATGINFRTTSPARIVPGPDGYELLPTSID
LGRRSSARVAGRFGEGIRLQSRFDRVNMAILNAVYPGMGIGGRASGSLDFEQAHADAFPR
ADARLTIRNFTRTTAVSVSQPVDVNFAGKLLADGGEARAVMRKRGTVVGRIQASLRPLGP
AAGAWTDRLRAAPLGGGVRYNGPADTLYSFFGPADQHVSGPVAVAADFGCRVADPCLNGV
VRGRDMVYENQTYGTRLVGMRVNGRFSGNRLEIAELTAKAGEGTVTASGYISLSQADGYP
MDLAATLDNARLARSENIAARATGNLRLQKSAGETALLSGDLRLPETRYRIVREGAAQVP
VLTGVRRKAPAGRTRISGDGLAALGGSLFDLIRLDIRLRASDEIYVRGMGLESEWEADVA
LRGTTLAPRVTGEIELVRGTLGFAGRSFELEEGRVTFPTGDAFDPAIRLIASDTIETVTV
SVSVTGRASNPQVAFSSVPGLPQDEIVSRILFGDSITTLSPLQAVQLASSLNTLSSGGGG
LSPLGALQSAAGIDRLRVLGPDDTIGRGAALAAGQYITKDIYLEVITDARGYTATQLEIS
LTRTLSLLSQAGGSGQSNLSIRYRKDY
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatctgcccgcgaccgaaacggcgccggtcgcggcgcggaactggccgcgc
gcgatcctgcgcggcgcgggatatgcgctgctgggcctcatccttcttttcgcgctgttc
ctcatcggattgaacagcgacgccgggcggcgtttcgtcgtcacccagattgaaaaatat
gagttcgaaaacgggatgaagatcggcatcggccgactcgacggctcgctctacagccgg
atgatcgtccgcgacttcaccctgtccgatcccaagggcgtgttcctgcgctcgcccgag
ttgcggatcgactggcggccactgcgctatctggcgagccacatcgacatccgctcagca
accgccgaaacgctggtgatggagaagctgccgacgttcaggccggtgcccgacaccggc
gagccgctgcttcccgacctcgacatcgacgtcggccgcctccgcgtcgatcgcttcatc
ttcgagcccgcggtggcgggtgagcgtcaggtggcgacgctgaacggccgcgtcgcgatc
gccgaccgccgcgcacagatcagcgccaatgccgaaaccatcggcgggggcggcaagggc
gatacgctgaagctgctcctcgacgcggtgccggagacgaaccggctggcgatgacgctc
gatatgagcgcccccgcgggcggcgtgctcgcgacgatgggcgggttcgaagagacgctg
acggcaaagctcgacgggcgcggtgactggaaagcgtggaacggcaatctgacggcgaac
ctcggcgccgcgccgctcgcccgcatcgcgctgagggcgcgcgacggcaattttgcagcc
aagggcaatgcgcagccgtcacggctgctcagcggcccgatggccgagctgctggcgcct
gaaaccgccatcgacgtaaaggcgcgcctcgccgggcgcaaggcggtgctcgacgggcgg
ctgacgtccagcgcggccgatcttggcatcagcggcggcgtcgatctcggcgccaatcgc
tttgaagagctcgcgctcgcggtcaacatccgtcgccccggcgcgatcgcgcccgcgctg
cgcgccagtggcttgcgcgcgacggcgacattcgacggtgcgtttgcacgtccaaaggtc
gattatcaggcgaatgccgccaaccttgcggtcaacgacatcatcatcgaccggctcagt
ctcgcgggcaaggcgcgtgtcgatgccgagcagatcctgattcccgtcgcgggccgggcg
gcgcgcattcgcgggctcgataccgttgcgggcgggacgctcgccgacgtgcggctcgac
ggcgacctcgcttatgccgatgggcggattctgagcgataatctgcgcctccgctcgccg
cggatcgatgccagggcgatcgtcgtcgccgatctgggtcgcggcttctacaccggcgca
atcgacgggcgggtgaatgattaccggatcgaaagcgtcggcatcttcgacatcgacacc
gacgccgacctcaagaccgcgccgcgcggcggctttgagatcgcgggccgcgttcgcgcg
cgttcgacgcggttgttcaactccggggtacgcgacgttcttggtggcaacgccacggtg
atcagcgatgtgcgatacggcaccgacggcgtcgtgcgcttttcgggcttgcggctgacg
gcgccgcgcctgcgcgtcaccggcgggcaggggagctatgcgccgggcggccagatacgc
ctcgccgcgcgggcgacctcgacggactatggcccgctgggtgtcgaactggctggcacg
atcagcgatccgcgcgcggtggtgaccgccgatcggccggggctgggtatcggtctcgcc
aatctcgtcgcgcgtgtcaccggcgcccccaagggctatcgcctcgccgcgacgggcgat
accgattatggcccgctcgccgccgatgtcgtgctgctcacggccgcggggccgctgacg
atcgacgtcgagcgcggcgacctgtcgggcatcggtttcagcggacgccttgtccagagc
gatgcgggtccgttcacgggccagctcgacgcatcggggcaagggctggggggcctcgtg
cggctcaccgccgcaggcgcgcatcaggccgccgcgatcaatgtgcgcgcgaacaatgtg
gtgcttcccggcccggcgcggctcgcggtcgggtcagcggtggtcgatgccgatgtgacg
ctgtacgagacgccgcacatcgtcgccgacatccaggtcgccgacacgcagatccgcgat
tatgacatcgccgtcgcgcgcgtgaagatcgattatcgcgccggcagcggcaaggcgcag
gcgctcatcgaaggcgtcagcggcgttcccttccgcatcgcggccaacgccgatctcaag
cccgacctgtggcgtgcgtcggtgcaggggcgtgcgacgggcatcaatttccgcaccaca
tcgcccgcgcggatcgttcccggccccgacggctatgaattgctgccgaccagcatcgac
ctcggccgccgcagcagcgcgcgcgtcgccgggcgcttcggcgaggggatcaggcttcag
tcgcggttcgaccgcgtcaatatggcgatcctcaatgccgtctatcccggcatggggatc
ggcggccgtgcgagcggcagtctcgatttcgagcaagcccatgccgacgcctttccgcgc
gccgacgcgcggctgacgatccgcaatttcacgcgcaccaccgccgtctcggtcagccag
ccggtcgacgtcaatttcgcgggcaagctgctcgccgacggcggcgaagcgcgcgcggtg
atgcgcaagcgcggcaccgtggtcggacgtatccaggcgtcgctgcgcccgctcggtccc
gccgcgggtgcgtggaccgaccggctgcgcgccgcgccgctcggcggcggcgtccgctat
aacggccccgccgatacgctctattccttcttcggccccgccgaccagcatgtgtcggga
ccggttgcggtcgccgccgatttcggctgccgcgtcgccgatccgtgcctgaacggcgtc
gtccgcgggcgcgacatggtttacgaaaaccagacctatggcacgcggctcgtcggcatg
agggtgaatggccgcttttccggcaaccggctggaaatcgccgaactgaccgcaaaggcc
ggcgagggcacggtcacggccagcggttatatcagcctgtcgcaggctgatggctatccg
atggacctcgccgcgacgctcgacaatgcgcggctcgcgcgcagcgagaatatcgccgcg
cgcgcgacgggcaatctgcggctgcaaaagtccgcgggcgaaaccgcgctcttgtcgggc
gaccttcgcctccccgaaacgcgctatcgtatcgtgcgcgaaggcgcggcgcaggtgccc
gtgctgacaggcgtgcggcgcaaggcgcctgcgggacgtacgcggatcagcggcgatggg
ctggccgcgctcggcggcagcctcttcgacctgatccgcctcgatattcgcctgcgggcc
tccgatgaaatctatgtccgcggcatggggctcgaatccgaatgggaggccgatgtcgcc
ttgcgcggcacgaccctggcgccgcgcgtgaccggcgagatcgagctggtgcgcggcacc
ctgggttttgccggacgctcgttcgagctggaggaggggcgtgtgaccttcccgaccggc
gacgccttcgaccccgcgatccgcctgatcgccagcgacaccatcgaaacggtaacggtg
agcgtcagcgtgacgggacgcgccagcaacccgcaggtcgccttctccagcgtgccgggg
ctgccgcaggacgagatcgtctcgcgcatcctgttcggcgattcgatcacgacgctgtcg
ccgcttcaggcggtgcagctcgcttcctcgctcaacacgctgagcagcgggggcggggga
ttgagcccgctcggcgcgctccagtcggcggccggcatcgaccgcctgcgcgtactcggc
cccgacgacacgatcggccgcggcgccgcgctcgccgcaggacaatatatcaccaaggat
atctatctggaggtcatcaccgacgcgcgcggctacaccgcgacgcagcttgagatcagc
ctgacccgcacgctttcactgctcagccaggcgggcggatcggggcagtcgaacctgtcg
attcgctatcgcaaggattattga
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