Sphingopyxis sp. FD7: SPYCA_1574
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Entry
SPYCA_1574 CDS
T10393
Name
(GenBank) recombinational DNA repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPYCA_1574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spfd03400
]
SPYCA_1574
DNA repair and recombination proteins [BR:
spfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPYCA_1574
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPYCA_1574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
HI1402_helical
Motif
Other DBs
NCBI-ProteinID:
BBB12316
LinkDB
All DBs
Position
complement(1675367..1675981)
Genome browser
AA seq
204 aa
AA seq
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MASLSADAIVCAVRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILVPGNRVALELR
SRTEAQLGGATVELLESRAPLLGEPLAAAAIDWVTSLTAATLPEEQPYPALYMVLSAVLE
AIGVAPSARQWALALGRYELLLLAELGFGLESRPNVAASSSMADALDLLSLTGYFIDRDL
LDGRNRALAGVRQRLIDRLGRAVA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttggccagcctgagcgccgatgccatcgtctgcgcggtgcgcgcgcatggcgagcatggc
gcgatcctgcgcgcgctgacgcacgaggcggggctggtcgcgggctatgtccgcggcggg
cggtcgcggcggctgcggccgatcctggtgcccggcaatcgcgtcgcgctggaactgcgt
tcgcgcaccgaggcgcagcttggcggcgcgaccgtcgagctgctggaaagccgcgcgccc
ttgctcggcgaaccgctggcggcggcggcgatcgactgggtgaccagcctgaccgcggcc
accttacccgaagaacagccttatcctgcgctttatatggtgttgtcggcggtgctggag
gcgattggcgtcgcaccctcggcgcggcaatgggcgctcgcgcttggccgttacgagctg
ctgctgctcgccgaactggggttcgggttggaaagcaggcccaacgtggcggccagttcc
tccatggccgacgcgctcgatctcctgtcgctcaccggctatttcatcgaccgcgacctg
ctcgacgggcgcaatcgtgccttggcgggcgtgaggcaaagattgatcgaccggctgggc
agggcggttgcgtga
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integrated database retrieval system
