Sphingopyxis sp. FD7: SPYCA_1715
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Entry
SPYCA_1715 CDS
T10393
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_1715
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_1715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MtrB_PioB
Motif
Other DBs
NCBI-ProteinID:
BBB12457
LinkDB
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Position
complement(1824994..1827282)
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AA seq
762 aa
AA seq
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MKTHLVALCAASALVSPVAVFAQQAPAADEQGGLEEIIVTAQKRAEGLSDVPISISAVSG
KQVENYGQTNLEQISSSVPNLKITQTAIANRIAIRGIASGDNKGFEQSVAMFVDGVYYGR
DQLSRLPLVDMERVEVLRGPQPTLFGKNAIAGAVNITTRSPTDALEGSVSGLYEFNHKEL
QLTGVLSGPLSDGVEARVVGYHRSMDGYFHNQELDRDEPNVDEYYVRGKLEFDKGGPFAA
ELKLEYADFEMKGQPRDVFGAVGNYNAVFQGPFFVSTDPDFIREDNGYESKNKVFGATLN
ADLELGDHTLTSVSSLLDYKTREIVDVDFSGISFLDGTNLREDYRQFSQELRLTSPGAEA
FNYIAGVYYQHAKLDVQDFTLFNPTFLALGAPFSALGDTSNDRAYTQKSDLISAFAQGEL
SVTDQLRITAGARFNHEKKSGSRRLAIVQGPLSTAPAPVVAAVFRALNIEAHSISGKISE
DSFNPMVNVQYDATDELMLYASYARGTKAGGFDIRSNSLPTSTTVARPGAFIFEDESADN
FEAGLKYKGRSVAFNVSLYRTDYKDLQVNIFDGTLNFNVRNAAEARTQGVEADFRAALAP
GLTVSGAVAYLDFKFTNFTDGQCFYLQTPGPNGFCDYSGKRNALSPKWSGNLNLDYTTPV
TSDIKVALNVNADFSSSYIAAVNLDPRTHQDGYVKLGARLALAEVDDRWEVALIGRNLTN
QRILQTASSMPLATTITRGAGNAYNGIVDRPRTIAVQLTGRF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcatttggtggcgctgtgtgccgcatccgcgcttgtcagcccggttgctgtt
tttgcccagcaggcgcccgctgccgacgagcagggggggctcgaggaaatcatcgtcacc
gcgcaaaagcgtgctgagggtctgtcggacgtgccgatctcgatctcggcggtcagtggc
aagcaggtcgaaaattacggacagaccaacctcgaacaaatctcctcgtcggtcccgaat
ctgaaaatcacccagaccgcgatcgccaaccgcatcgcgatccgcggcatcgcgtcgggc
gacaacaagggctttgaacagtcggtcgcgatgttcgtcgacggcgtctattacgggcgc
gaccagctgtcgcgcctgccgcttgtcgacatggagcgcgttgaggtgctgcgcgggccg
cagccgaccttgtttggcaagaatgctatcgcgggggcggtcaatatcacgacacgcagc
ccgaccgacgcgctcgaaggctcggtgagcggtctctatgagttcaaccacaaggaattg
cagctgaccggagtgctttcggggccgctgagcgacggggtcgaagcgcgcgtcgtcggt
tatcaccgttcgatggacggttatttccataatcaggagctcgaccgcgacgagccgaat
gtcgatgaatattatgtccgcggcaagctggagttcgacaagggcgggcccttcgccgcc
gagctgaagctcgaatatgccgatttcgagatgaagggccagccgcgcgacgtgttcggc
gcggtcggcaattacaacgccgttttccagggccccttctttgtcagcaccgatcccgat
ttcatccgcgaggacaatggatatgaaagcaagaacaaggtgttcggcgcgacattgaat
gccgatctcgaactaggcgatcacacgctgacctcggtttcgtcgctgctcgattacaag
acgcgcgagattgtcgatgtcgatttttcgggcatcagcttcctcgacggcaccaatttg
cgcgaggattaccgccagttcagccaggagttgcggttgacatcgccgggcgccgaagcg
ttcaactatatcgcgggggtctattaccagcacgccaagctcgacgtgcaggatttcacc
ctgttcaatccgaccttcctcgcgctcggagcaccgttcagcgcgctgggcgacaccagc
aacgatcgcgcctatacacagaaatcggacctgatttcggcctttgcgcaaggcgaattg
tcggtaaccgaccagctgcgcatcaccgcgggcgcgcggttcaaccatgaaaagaaaagt
ggtagccgcaggctggcgatcgtgcagggaccgctcagcactgcgcccgcgccggtcgtt
gcggcggtgttccgcgcgctcaatatcgaggcacacagcatttcgggcaagatcagcgaa
gacagtttcaacccgatggtcaacgtccaatatgacgcgaccgacgagctgatgctctat
gcctcctatgccaggggcacgaaggcgggtggctttgacatcaggtcgaactcgctcccg
acctcaacgaccgtcgcgcggccgggagccttcatcttcgaggacgaaagcgccgacaat
ttcgaggcggggctgaaatacaaggggcgcagtgtcgcgttcaacgtctcgctctatcgc
accgattacaaggatcttcaggtcaatatcttcgacggcacgctgaacttcaacgtccgc
aatgccgccgaagcgcgcacgcaaggcgtcgaggcggatttccgcgccgcgcttgctccg
gggctgacggtcagcggcgcggtcgcctatctcgacttcaagttcaccaatttcaccgac
ggccaatgcttttatcttcagacgccgggaccgaatggtttttgcgactattcgggcaag
cgcaacgcattgagccccaaatggtcgggcaatttgaatctcgattatacgacgccagtg
acgagcgacatcaaggttgcgctcaatgtcaacgccgacttttcttcctcctatattgcc
gcggtaaacctcgacccacgcacgcatcaggacggttatgtgaagctcggcgcgcggctg
gcgctggccgaggtcgacgatcgctgggaggtcgcgctgatcggtcgcaacttgaccaat
cagcggatattgcagaccgcaagctcgatgccgctggcgacgacgatcaccagaggggcg
ggcaacgcctataatggcattgtcgaccgtccgcgcacgatcgcggtgcagctgaccggg
cggttttga
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