KEGG   Sphingopyxis sp. FD7: SPYCA_1774
Entry
SPYCA_1774        CDS       T10393                                 
Name
(GenBank) nucleoid DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
spfd  Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:spfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spfd03032]
    SPYCA_1774
   03036 Chromosome and associated proteins [BR:spfd03036]
    SPYCA_1774
   03400 DNA repair and recombination proteins [BR:spfd03400]
    SPYCA_1774
DNA replication proteins [BR:spfd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SPYCA_1774
Chromosome and associated proteins [BR:spfd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SPYCA_1774
DNA repair and recombination proteins [BR:spfd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SPYCA_1774
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 Peptidase_M35 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: BBB12516
UniProt: A0A2Z5UM58
LinkDB
Position
complement(1887688..1887960)
AA seq 90 aa
MNKQDLIAAVADSSGLTKGDASKAVEAVFDAITGALKKGGEVRLVGFGTFAVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaacaagacctgatcgccgccgtcgccgattcgagcggcctgaccaagggtgat
gccagcaaggccgtcgaagccgtcttcgacgcgatcacgggcgcgctgaagaagggcggc
gaagtccgtctcgttggcttcggcaccttcgcggtcagcaagcgcaaggcgtcgaccggc
cgcaacccgcgcaccggtgaaacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgccgtcaactaa

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