Sphingopyxis sp. FD7: SPYCA_1982
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Entry
SPYCA_1982 CDS
T10393
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spfd03400
]
SPYCA_1982 (radA)
DNA repair and recombination proteins [BR:
spfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPYCA_1982 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_30
AAA_22
AAA_16
AAA_24
AAA
Lon_C
AAA_5
SLFN-g3_helicase
NTPase_1
CobU
RecA
nSTAND3
AAA_14
ATPase_2
Glyco_hydro2_C5
DUF7125
Helicase_RecD
ABC_tran
CbiA
AAA_29
zf-RING_10
NACHT
DAGK_prokar
Motif
Other DBs
NCBI-ProteinID:
BBB12724
UniProt:
A0A2Z5UMW0
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Position
complement(2103891..2105252)
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AA seq
453 aa
AA seq
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MAKAKRQYVCQNCGGVSYRWQGQCADCGEWNTLVEEAAETVFSAKHDLSKGGRTLALETL
DAASSMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRLAKAGRSVV
YISGEEAAAQVRLRAQRLGLGDAPVALASATSVRDILATLDRQTADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRHAKDSGAAIVLVGHVTKDGTIAGPRVLEHMVDTVLAFEGE
RSHQYRILRAVKNRFGGTDEIGVFAMGEEGLGEVSNPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQMGAAEVYLNIAGG
YRLTDPAADLAVAAALISAFSERPVPADAIVFGELSLSGEVRPVAHDALRLREAAKLGFS
SGWGPKGMKRVNGIGVTGFARVGELVDLMLGRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaaagcgtcaatatgtttgccagaattgcgggggcgtatcttaccgttgg
caggggcagtgcgccgattgcggtgagtggaacacgctggtcgaagaggccgccgaaacc
gtcttttcggccaagcacgacctgagcaaaggcggacgcacgctcgcgctcgaaacgctc
gatgccgcgagctcgatgcccgaacggatgctgtgcgggatcgccgagttcgaccgcgcg
ctcggcggcggcttcgttgcgggttcggcgacgctgatcggcggcgatccgggaatcggc
aaatcgaccttgctgctccaggccgccggaaggctcgccaaggcgggcaggtcggtcgtc
tatatcagcggcgaagaggccgcggcgcaggtgcggctgcgcgcgcagcgactggggctg
ggcgatgcgcctgtggcgctcgcgagcgcgacgtcggtgcgcgacattctcgcgacgctc
gaccgccagaccgccgatttcgtcgtgatcgattcgatccagacgatgcacagcgacctg
atcgacagcgcgccggggacggtgagccaggtacgcgcgagcgcgcaggaattgatccgc
catgccaaggatagcggcgcggcgatcgtgctcgtcggccatgtgaccaaggacgggacg
atcgccgggccgcgcgtgctcgaacatatggtcgacacggtgctggcgttcgagggcgag
cgcagccaccaatatcgcatcctgcgcgcggtgaagaaccgctttggcggcaccgacgag
atcggcgtgttcgcgatgggcgaggaggggctgggcgaggtatcgaatccgtcgagcctg
ttcctgaccgaccgcagccgcgacgtgccgggatcggtcgtgttccccgcattggaaggc
acgcgcccggtgctggtcgaggtgcaggcgctgaccgtgcgcctcgcgagcggcgcgact
ccccgcagggccgtcgtcggctgggacagcgggcggctcgcgatggtcctcgcggtgctg
gaggcgcgctgcgggctgcaaatgggggcggccgaagtctatctcaacatcgcgggcggc
taccggctcaccgatcccgccgccgatctcgccgttgctgccgcgctgatctcggcgttc
agcgagcgaccggtgcccgccgatgcgatcgtcttcggcgaattgtcgctttcgggcgag
gtgcgccctgtcgcgcacgacgcgctgcggcttcgcgaagcggcaaagcttggattctca
agcggctgggggccgaaggggatgaagcgcgtgaacggaatcggcgtcacgggctttgcg
cgggtcggcgaactcgttgacctgatgctcgggcgcgactag
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