Sphingopyxis sp. FD7: SPYCA_2120
Help
Entry
SPYCA_2120 CDS
T10393
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spfd03000
]
SPYCA_2120
Transcription factors [BR:
spfd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SPYCA_2120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
TOBE_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
BBB12862
UniProt:
A0A2Z5UYQ5
LinkDB
All DBs
Position
complement(2239892..2240680)
Genome browser
AA seq
262 aa
AA seq
DB search
MDVGGLRVASITDRIDGPSTWTIERDVHALILYEAGSYHWLETWQDGQRTSLGDPLPGEM
WLIPAGRVYRAEAKGGGARYIDIEIPRSRLTVAPGTRALAAHHDLTLAALGRALAAGDAA
AADPFVTILRETLAGMAGRPDPPAIGDRINQLMRFIQTQLEMPLTVEDMAAEAGMSVNSL
IVHFARATGRTPAQYVLRQRLRRACWFLMNRPLSIAEIAFATGFSSHAHLCAVFRRKIGM
SPGEWRRRHRSAILPDVEGAAV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggaggactcagggtcgcctcgatcaccgatcggatcgatggcccgtcgact
tggacgatcgaacgcgatgtccacgcgctgatcctctatgaggccggaagctatcactgg
cttgaaacctggcaggatgggcagcgcacatcgcttggcgatcccttgccgggcgagatg
tggctgatccctgcggggcgcgtctatcgcgccgaagcgaagggcggcggcgcgcgttat
atcgacatcgaaatcccgcgctcgcggctgactgtcgcgccgggcacccgcgcgctcgcc
gcgcatcacgatctgacgctggcggcgctgggccgcgcgctcgcggccggcgatgccgcg
gccgccgacccgttcgtcaccatcctccgcgaaacgctggccggaatggctgggcgcccc
gacccgcccgcgatcggcgatcgcatcaaccagctgatgcgtttcatccagacgcagctc
gaaatgccgctgaccgtcgaggatatggcggccgaggccggcatgtcggtcaacagcctg
atcgtccatttcgcgcgcgcgacggggcggacgcccgcgcaatatgtgctgcgccagcgg
ctgcgccgcgcctgctggttcctgatgaaccgcccgctgtcgatcgccgagatcgcattt
gccaccggcttttcgagccacgcgcatctgtgcgcggtctttcgccgcaagatcggcatg
tcgccgggcgagtggcggcggcgtcatcgttcggctatcctgcccgacgtcgaaggcgcg
gcagtttga
DBGET
integrated database retrieval system
