Sphingopyxis sp. FD7: SPYCA_2183
Help
Entry
SPYCA_2183 CDS
T10393
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spfd03036
]
SPYCA_2183
Chromosome and associated proteins [BR:
spfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCA_2183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
BBB12925
LinkDB
All DBs
Position
complement(2296316..2300656)
Genome browser
AA seq
1446 aa
AA seq
DB search
MTNLPLAGASVRLPAASDPDNIALAIIAAAQDLLGHLAAGRRIDSSAIRTAMQSAFGASD
ASGAWDWKTAYEAVEVAQVLFMRRYGPAIHARSADPFDRLKLVERIAALAPTQTRRSEEM
QLYQQFSTPLGLAWIAGFAAGFGPGELVLEPSAGTGLLAIQAELGASRLALNEVADVRAA
LLRQLFGESHVSVHDAAQIHDRLDPVIVPTCIVMNPPFSAALGIEARVADTAFRHLSSAV
ARLADGGRLVAITGANCSPDHSTWRSAFVRLQEKARVVFTAPIAGAVYAAHGTTFETRLT
VIDKLPAIDPTSFPATPGMAPDLAALLRWLITALPPRSPVAVAPLPAPIAQSAKRSATTA
RTKLSVVPSAEPCGVELAYETADWSDDAMARLSDTLYEPYALQSLRIPDARPHPTMLVQS
AAMASVAPPKPSYRPHLPEGLVEQGMLSDAQLESVIYVGEAHSSHLEGRWTIDATYDKVE
AAPDDSETAVRFRKGWFLGDGTGAGKGRQVAGIILDNWLKGRRRAIWISKSDKLLEDAQR
DWCALGQETLLVTPLARFRQGAPIRLDQGILFTTYATLRSDARDGRVSRVQQIVDWLGHD
FDGVIVFDESHAMQNAGGGKSERGDAAPSQQGRAGLRLQHALPDARVLYVSATGATTVEN
LAYAQRLGLWGGADFPFDKRTDFVTAIEAGGVAAMEVLARDLKALGLYSARSLSYEGVEY
ELLEHQLTLDQVRIYDAYAGAFQVIHNHLDAALEASGVTSSSDGTLNAQAKSAARSAFES
SKQRFFNHLITAMKTPTLIRAIEQGLADGHASVVQIVSTGEALLSRRLAEIDPGEWNDVR
CDVTPREYVLDYLAHSFPTQLYEPYSDGDGNLASRPAYDADGNVIQCREAIERRDRLIEH
LASMEPVQGALDQIVQRFGTDMVAEVTGRSRRIVRKVDADGERFVVESRPVHANLAEAQA
FMEDRKQILVFSDAGGTGRSYHADLGSRNQRLRHHYLLEAGWKADAAIQGLGRTNRTNQA
QPPLFRPVATDVQAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESPYARDAL
RQFYLLIYAGKVEHCSLATFESMTGLSLTDGSGCLKDELPPIITFLNRLLALTIAMQNVL
FTVFEQLLTAKVESAMASGTYDVGLETLTADSFSVAHSETIYAHPATGAETCLLTIAVRE
RNTPVTADAALDLLREPGAKLLVNSRSKRAAVQLPARSLMLDDGEVERRVRLIRPMEKLN
FALAHLQETSWEQADESAFRLAWDAEVAQVSEFDTSELHIVTGLLLPIWKRLPEESTRVY
RLRTDDGQTIVGRRVSQAWAANAVSADAPQLSPSQALALLREGHSVIDLTVGLQLRRSRL
MQVNRIELTGFGPTAVDRLKAMGLFSEIISWKLRLFVPDDRVAGCQVLERLFTHHPLARI
LDRKAA
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctgcctttggcgggcgcttccgtgcgcctacctgccgcttccgacccggac
aacatcgcccttgccatcatcgcggcagcccaagacctgctcggtcaccttgccgccggt
cgccgcatcgattcttcagccatccgtaccgccatgcaatccgcctttggtgctagcgac
gccagcggcgcctgggactggaaaaccgcctacgaagcggtcgaggtggcccaagtcctg
ttcatgcgccgctatggaccggcgatccatgctaggtctgccgatccgttcgaccggctg
aaactggtcgagcgcattgcggccctcgcgcccacccagacccggcgcagcgaggaaatg
cagctctaccagcagttctcgacgccgctggggctggcatggatcgcggggttcgcggca
ggcttcggtccgggcgaactggttctcgaaccgtcggcaggcaccggtctgctcgccatt
caggccgaacttggcgcgagcaggttggcattgaacgaggttgccgatgtacgggctgcg
ctgctgcgccagctgttcggcgaaagccatgtttccgtccacgacgcggcgcagatccat
gatcggctcgaccctgtcatcgtcccgacctgcatcgtaatgaacccgccattctcggcg
gcgcttggcatcgaggcccgcgttgccgacacggcatttcggcatctgtcgtccgcagtc
gcccggcttgccgatggcggtcggctcgtcgccatcaccggcgcgaactgctcgcccgat
catagtacatggcgaagtgcgttcgtccgcttgcaggagaaggcgcgcgttgtgttcacc
gcgccgatcgcgggcgccgtctatgcggcgcacggcacgaccttcgaaacccgactgacg
gtgatcgacaagttgcccgccatcgatcccacctcgttcccggccacaccgggcatggct
cccgacctggcggcgctgctgcgctggctgatcactgcccttccgccacgttcgccagtt
gctgttgcaccgcttcccgcgccgattgcgcaaagtgccaaacgttcagccaccactgcc
cgaacgaagctgtcggttgtcccttccgctgaaccgtgcggcgtggaacttgcctatgag
accgccgactggtcggacgacgccatggcccggctgagcgacacgctctacgagccctat
gcgctccagtcgctgcgcatcccggacgcgcggccacatccgaccatgctggtgcaatcc
gccgccatggcctcggtcgcgccgcccaagccgagctaccggccgcacctgcctgaaggc
cttgtcgaacagggtatgctctcggatgcccagctggagtccgtgatctatgttggcgaa
gcccattcctcccatctcgaagggcgctggaccatcgatgcgacctacgacaaggtcgag
gccgcccccgacgacagcgaaactgccgtgcgcttccgcaagggctggttccttggcgat
ggcaccggcgcgggcaagggccgccaggttgccgggatcattctcgacaattggctcaag
ggccgccgccgcgcaatctggatctcgaaatccgataaactgctcgaggatgcccagcgc
gactggtgcgcattgggccaggaaaccttgctggtaaccccgctcgcccgtttccgccag
ggcgcgccgatccggctcgatcagggcatcctttttacgacctatgccacgctacgcagc
gatgcgcgtgatgggagggtttcgcgggtccagcagatcgtcgattggcttgggcacgac
ttcgatggagtcattgtcttcgacgaaagccatgcgatgcagaatgctggtggcggcaag
agcgaacgcggcgatgcggcaccctcgcagcagggccgtgcgggactgcggctgcaacat
gcgctccccgacgcccgtgtcctctacgtctcggcaaccggggcgaccacggtcgagaac
cttgcctatgcgcagcgccttggcctgtggggcggcgcggacttcccgttcgacaaacgc
accgatttcgtcacggcgatcgaggcaggcggcgtcgcggcgatggaggtgctggcccgc
gacctcaaggcactcgggctctattccgcccgttcgctgtcctacgaaggcgtcgagtac
gaactgctcgaacatcagctgaccctcgaccaggtccgcatttacgacgcctacgccggg
gcgtttcaggtgatccacaaccacctcgacgccgcgctcgaagcctcgggcgtgaccagc
agcagcgatggcaccttgaatgcacaggcaaagtctgcggcccgctccgccttcgaatcg
agcaaacagcgcttcttcaatcacctgatcacggcgatgaagaccccgaccctgatccgg
gcgatcgaacagggcttggccgatggtcatgcctcggtcgtccagatcgtctcgaccggt
gaagcgctgctgtcgcggcggctcgccgagatcgatccgggtgaatggaacgacgtccgc
tgcgacgtgacccccagggaatacgttctggactatttggctcacagcttcccgacgcag
ctttacgagccctattcagacggcgatggcaacctcgcctcgcggcccgcctatgatgcc
gatggcaacgtcatccaatgccgggaggccatcgaacggcgcgaccgactgatcgaacat
ctggcgtccatggaaccggtccagggcgcgctcgaccagatcgtgcagcggttcggcacc
gacatggttgccgaggtcaccggacgttcccgcaggatcgttcggaaagtcgatgcagac
ggcgaacggttcgtggtcgagagccggcctgtccatgccaacctcgccgaagcgcaggcg
ttcatggaggaccggaagcagatcctggtcttctccgacgcgggcggcacggggcgcagc
taccacgccgatctcgggagtcggaaccagcggctgcgacatcactacctgctcgaagcc
gggtggaaggccgatgctgcgatccaggggctcgggcgcaccaaccgcaccaatcaggcg
cagccgccgctgttccgcccggtggcaaccgatgtgcaagccgagaaacgcttcctttcg
acaattgctcggcggctcgacactcttggcgcaatcacgcgcgggcagcgccagaccggc
gggcaaggcctgttccgccccgaagacaatctcgaaagcccctatgcccgcgacgcgctg
cgccagttctacctgctgatttacgcgggcaaggtcgagcactgctcgctggcgaccttc
gagagcatgaccgggctgtcgctcaccgacggtagcgggtgcctgaaggacgaactgccg
ccgatcatcaccttcctcaaccggctgctggcgctgaccatcgccatgcagaacgtcctg
ttcacggtgttcgagcagttgctgaccgccaaggtcgagagcgcgatggctagcggcaca
tatgatgtcgggctcgagacgctaacagcggacagtttctccgtggcgcacagcgagacg
atctacgcacatcccgcgacgggtgcagagacctgcttactcacgatcgctgtccgcgag
cgcaatacaccagtgaccgccgatgcggcactcgacttgctgcgcgaaccgggtgcaaaa
ttgctggtcaattcccgttcgaagcgggcggccgtgcaattgcccgcacgtagcctgatg
ctcgatgacggcgaggtcgaacgccgtgttcggctgatccggcccatggagaagctcaac
ttcgccctcgctcatctgcaggaaaccagttgggaacaggccgacgagtccgcgttccgg
ttggcatgggatgccgaagttgcccaagtctccgagttcgacactagcgaactgcacatc
gtcaccggtctgctgctgccgatctggaagcggcttccggaggaatcgacgcgcgtctat
cgcctgcgcacggacgacggccagaccattgtcggtcgccgggtgtcacaggcttgggcc
gcgaatgcggtcagcgcggatgcgccgcaactgtcgccgtcgcaagctctggcgttgctg
cgcgaaggtcatagtgtgatcgacctgacagttggtctgcaactgcgccgctcgcggctg
atgcaggtcaaccggatcgagctgaccggcttcggtccgaccgccgttgaccgcctcaaa
gccatgggactgttctcggaaatcatcagctggaagctccggctgttcgtgcccgacgac
cgtgtggcgggttgccaggtgctcgaacgactgttcacgcaccatccgctggcgcgtatc
ctcgaccggaaagccgcgtga
DBGET
integrated database retrieval system