Sphingopyxis sp. FD7: SPYCA_2216
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Entry
SPYCA_2216 CDS
T10393
Symbol
lysK
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPYCA_2216 (lysK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spfd01007
]
SPYCA_2216 (lysK)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spfd03016
]
SPYCA_2216 (lysK)
Enzymes [BR:
spfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPYCA_2216 (lysK)
Amino acid related enzymes [BR:
spfd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SPYCA_2216 (lysK)
Transfer RNA biogenesis [BR:
spfd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPYCA_2216 (lysK)
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Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
Anticodon_2
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BBB12958
UniProt:
A0A2Z5UNH7
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Position
complement(2330446..2332059)
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AA seq
537 aa
AA seq
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MGGAMTDLHLHPSLREPAQTSKAWPFEEARKLVKRYPGGKPGGEAVLFETGYGPSGLPHI
GTFNEVLRTTMVRRAYETLTGGAATRLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTA
IPDPFGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYRSGAFDEALKNVLRHNQDILD
IMLPTLRAERAATYSPILPISPRSGIVLQVPVTVVDAEAGLVSFEEEGETITHSILGGGA
KLQWKVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIAKALGGRKPEGLIYEMFLDEKGEK
ISKSKGNGLSMEEWLAYGSEESLAFYAYREPKAAKQLHIGVVPKAVDEYLQMRGAYPAQE
PDKKLGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADASKEQIWRYLGQYVPGAD
AATYPELDRLIDNAMAYNRDFVAPTLKRRKPEGGEVAALRELDARLAALPADASADDIQN
IVYEIGKNEAHGFDNLRDWFKALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgccatgaccgacctgcatcttcatccgtcgctgcgcgagcccgcgcaaacg
tccaaggcctggccgttcgaggaagcgcgcaagctggtcaaacgctatccgggcggcaag
cccggcggcgaagccgtgctgttcgagaccggctatggcccgtcggggctgccgcatatc
ggcacgttcaacgaagtgttgcgcacgacgatggtgcgccgcgcctatgaaacgctgacc
ggcggcgctgcgacgcggctggtggcgttcagcgacgatatggacgggctgcgcaaggtg
cccgacaatgtgccgaacggcgccatgctgcgcgagcatctggggcggccgctgaccgcg
atccccgaccccttcggcaaatatgagagtttcgcgcaccacaataatgcgatgctgcgc
gagtttctcgaccgcttcggcttcgattacgagtttgtgagctcgaccgagcgctatcgg
tcgggggcgttcgacgaggcgctcaaaaatgtgctgcgccacaatcaggatatcctcgac
atcatgctgccgacgctgcgcgccgagcgcgccgcgacctattcgccgatcctgccgatc
agccccaggtcggggatcgtgttgcaggtgccggtcacggtggtcgacgccgaggcgggg
ctggtgtcgttcgaggaagagggcgagacgatcacgcacagcattctgggcggcggcgcg
aagctgcaatggaaggtcgactgggcgatgcgctgggtcgcgctgggcgtcgattatgaa
atgtacggcaaggatctgaccgacagcggggtgcagtcgggcaagattgcgaaagcactc
ggcgggcgcaagcccgaagggctgatctatgagatgttcctcgacgagaagggcgagaag
atttccaagtcgaagggcaatggcctgtcgatggaggaatggctggcctatggcagcgag
gaaagcctggccttttacgcctatcgcgagcccaaggcggcgaagcagctgcatatcggc
gtggtgccgaaggcggtcgacgaatatctgcagatgcgcggcgcctatccggcgcaggag
cccgacaagaagctgggcaacccggtgcatcatgtccatgtcgcgcgcgggcaggatgtg
ccggagacggtgctgccggtgacctatggcctgttgctcaacctcgtcggcgtgatgggc
gccgatgcgtcgaaggagcagatctggcgttacctcggccaatatgtcccgggcgccgat
gccgcgacttatcccgagctcgaccggctgatcgacaatgcgatggcgtataaccgcgat
ttcgtcgcgccgacgctgaagcgccgcaagcctgagggtggcgaggtcgcggcgctgcgc
gagctggatgcacggctggccgcgctgcccgccgacgcctcggccgacgacatccagaat
atcgtctatgaaattggcaagaacgaggcgcatggcttcgataatctgcgcgactggttc
aaggcgctgtacgagacattgctgggatcgagcgccgggccgcggatgggcagctttatc
gcgctgttcggggtggagaatacgcggcggctgatcgccgaggcgctgacctga
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