Sphingopyxis sp. FD7: SPYCA_2234
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Entry
SPYCA_2234 CDS
T10393
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_2234
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_2234
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Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MtrB_PioB
DUF2490
Porin_4
Motif
Other DBs
NCBI-ProteinID:
BBB12976
LinkDB
All DBs
Position
2349913..2352003
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AA seq
696 aa
AA seq
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MKKLLLLTAAAAAFPATAHASEAEREDARTILVIGKSDGYVATNSVTATKTDTPLIDVPQ
TISVVTRERLDDQASRSIADVLRYVPGTTIGQGEGNRDQITLRGQNTTADFFLDGVRDDV
QYFRSLYNIERVEILKGPFAMIFGRGGSGGVINRVQKTPSSEALAVGGALSANSFGAWDV
SADVNAPIGGGAAFRLNAHYESLDNHRDFFDGERYAINPYVAVDLGRWKLGLSYEYVNDD
RVTDRGVPSIATAPGRPNRPITGYRDTFFGVPGVNRTGLEAHIVKARIDGELAEALTWST
TLLYGDYDKYYTNVFANGAATGPTGTVALSSYTDPTRRQNFIAQSNLLWDVDVGGIENRI
LLGIEYGDQDSTNQRRNGTLSNATLDLANIVYPTVSFGALVRNTESRVQFFSAYAQDQIA
FGEHVDLVLGVRYDRFEIKGTDLIGTPRAFGRTDEKLSPRLGLILKPQENVSIYGSYSRS
FLPRSGDQFLTLAPASGSSPAQEDLTPERMVNYEIGAKWDIRPDLNLTLALFRLDRNNTA
VPVAGVPGSQFLTDTRTRGIELALTGRITPNWQVSGGYTYQDAHRKNDDSIRLGQVPRHQ
IALWNRYDFNDKVGMGLGVVHQSSQFAAIRTAPTVTRLPAFTRVDAALFVKANERVEFQV
NVENLLDESYFSDAHNLNNITPGAPINARFTARIRY
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaactgcttttgcttaccgccgccgctgcggcctttccggcgacggcacacgcc
agcgaagccgagcgcgaggacgcgcgcaccattctggtgatcggcaagtcggacggctat
gtcgcgaccaactcggtcacggcgaccaagacggatacgccgctgatcgacgtgccccag
acgatttcggtggtcacgcgcgagcggctggacgaccaggcgtcgcgttcgatcgccgac
gtcctgcgctacgtccccggcaccaccatcggccagggcgagggcaaccgcgaccagatc
accctgcgcggccagaacacgaccgccgacttctttctcgacggcgtgcgcgacgacgtc
cagtatttccgcagcctctacaacatcgagcgggtcgagatactcaagggccccttcgcg
atgatctttggccgcggcggcagcggcggcgtcatcaaccgggtgcagaaaacgccgtca
tccgaagcgctggcggtcggcggcgcgctcagcgccaacagcttcggcgcgtgggacgtt
tcggcggacgtcaatgcgccgatcggcggcggcgcggcgttccggctcaacgcccattac
gagagcctcgacaatcatcgcgatttcttcgatggcgaacgttatgcgatcaacccctat
gtcgcggtcgatctgggccggtggaagctgggcctgtcctacgaatatgtgaacgacgac
cgcgtgaccgatcgcggggtgccgtcgatcgcaaccgcccccggacggccgaaccgcccg
atcaccgggtatcgcgacacatttttcggcgttccgggcgtcaatcgcacggggctggag
gcgcatatcgtcaaggcgcggatcgacggcgaactggcggaggcgctgacatggtcgacc
acgctcctttatggcgattatgacaaatattacaccaacgtctttgccaatggcgcggcc
accggcccgaccggcaccgtcgccctgtcgagctacaccgacccgacccggcgccagaac
ttcatcgcgcagagcaacctgctctgggacgtcgacgtcggagggatcgaaaaccggatt
cttttgggcatcgaatatggcgatcaggattcgaccaatcagcgccgcaacggcacgctg
tcgaacgccacgctcgaccttgccaacatcgtctatcctacggtcagcttcggcgcgctg
gtccgcaacaccgaatcgcgcgtccagttcttctcggcctatgcgcaggaccagatcgca
ttcggcgagcatgtcgacctcgtcctcggcgtgcgttacgaccggttcgagatcaagggc
accgacctgatcggcacgccgcgcgccttcggccgcaccgatgaaaagctgtcgccgcgg
ctcggcctgatcctgaagccgcaggaaaatgtctcgatctacggcagctacagccggtcc
ttcctcccccgatcgggcgatcagttcctgacgctggcgcccgcgtcgggctcgtcgccg
gcgcaggaagatctgacgcccgaacggatggtcaattacgaaatcggcgccaaatgggac
atccggcccgatctcaatctcacgctggcgctgttccggctcgaccgcaacaatacggcc
gtgccggtcgcgggcgtgccgggatcgcagtttctgaccgacacgcggaccaggggcatc
gaactggcgctgaccggccggatcacgccgaactggcaggtgagcggcggctatacctat
caggatgcgcatcgcaagaatgacgacagcatccggctgggacaggtgcccaggcatcag
attgcgctgtggaaccgctatgatttcaacgacaaggtcgggatgggactgggcgtggtc
catcagtcaagccagttcgccgccattcgcaccgcgccgacggtgacgcgcctgcctgcc
ttcacgcgcgtcgatgccgcgctgttcgtcaaggcgaacgagcgcgtcgagttccaggtc
aatgtcgaaaatctgctcgacgaaagctatttctccgacgcgcacaacctcaacaacatc
acgccgggggcaccgatcaacgcccgcttcacggcgcgtatcagatattga
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