Sphingopyxis sp. FD7: SPYCA_2270
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Entry
SPYCA_2270 CDS
T10393
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd00300
Lysine biosynthesis
spfd00470
D-Amino acid metabolism
spfd01100
Metabolic pathways
spfd01110
Biosynthesis of secondary metabolites
spfd01120
Microbial metabolism in diverse environments
spfd01230
Biosynthesis of amino acids
Module
spfd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPYCA_2270
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPYCA_2270
Enzymes [BR:
spfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SPYCA_2270
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBB13012
UniProt:
A0A2Z5UYV3
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Position
complement(2380562..2381821)
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AA seq
419 aa
AA seq
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MDHFEYRDGVLHAEDIPLPQIAEEIGTPVYVYSRATLERHAQVFADALKDIPKKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEPEGVALSEIAVGKETTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDAAP
AIFDRLSALPGLKMRGVALHIGSQLTSLDPLEAAFARVGRLVAELRAAGHSITHVDLGGG
LGVPYRPEDNPPTPAEYGAMVARVTKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGAVS
PFVIVDAAMNDLARPALYDAYHDFVAVRPTGEKMTASIVGPVCETGDTFARDRVIDKVAA
GDLAAFRTAGAYGATMASTYNSRSLVPEVLVDGDRYVTVADRIAAGTIMAAERVPDWID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaatatcgtgacggcgtcctccacgccgaagacatcccgctgccgcaa
attgccgaggagatcggcacccccgtctatgtctattcgcgcgcgacgctcgaacgccat
gcacaggtgttcgccgacgcgctcaaggatattccgaaaaagcacatcgccttcgcgatc
aagtgcaaccccaatctcggcgtgctgcgtgtcctcgcgcggcagggttatggcgccgac
gtcgtttcgggcggcgagctcgaacgtgcgctcgccgcgggcatggcggccgaggacatc
gtcttttcgggcgtcggcaagacgcgcgccgaactggcgctcggcctcgaccgcggcatc
gggcagttcaatatcgagcacgagcccgaaggcgtcgcgctgtccgaaatcgcggtgggg
aaggagacgaccgcgcgcgccgtgctgcgcgtcaatcccgacgtcgacgccggcacgcac
gccaagatttcgaccggcaaggccgaaaacaagttcggcgtcggcatcgatgccgcgccc
gcgatcttcgaccggctttcggcgctgccggggctcaagatgcgtggggtggcgctccat
atcggcagccagctcaccagcctcgatccgctcgaggccgcgttcgcgcgcgtcggccgc
ctcgtcgccgagctgcgcgccgcggggcacagcatcacccatgtcgatctcggcggcggc
ctcggcgtgccctatcggcccgaggataatcccccgacccccgccgaatatggcgcgatg
gtcgcgcgcgtgacaaaggattgggacgtcaccctgatgttcgagcccggccgcgtcatc
gcgggcaacaccggggtgctcttgaccgaagtgctgtgggtcaagccaggcgcggtaagc
cccttcgtcatcgtcgacgccgcgatgaacgatctcgcgcgcccggcgctctacgatgcg
tatcacgacttcgtcgcggtccggcccacgggcgaaaaaatgaccgcgtcgatcgtcggc
ccggtgtgcgagacgggcgataccttcgcgcgcgaccgggtgatcgacaaggtggcggcg
ggcgatctcgccgccttccgcaccgcgggcgcctatggcgcgacgatggcgtcgacctac
aacagccgcagcctcgtccccgaagtgctcgtcgacggcgaccgctacgtcaccgtcgcc
gaccgcatcgccgcgggtacgatcatggcggcggagcgcgtgccggattggatcgactga
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