KEGG   Sphingopyxis sp. FD7: SPYCA_2270
Entry
SPYCA_2270        CDS       T10393                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
spfd  Sphingopyxis sp. FD7
Pathway
spfd00300  Lysine biosynthesis
spfd00470  D-Amino acid metabolism
spfd01100  Metabolic pathways
spfd01110  Biosynthesis of secondary metabolites
spfd01120  Microbial metabolism in diverse environments
spfd01230  Biosynthesis of amino acids
Module
spfd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:spfd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SPYCA_2270
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SPYCA_2270
Enzymes [BR:spfd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SPYCA_2270
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BBB13012
UniProt: A0A2Z5UYV3
LinkDB
Position
complement(2380562..2381821)
AA seq 419 aa
MDHFEYRDGVLHAEDIPLPQIAEEIGTPVYVYSRATLERHAQVFADALKDIPKKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEPEGVALSEIAVGKETTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDAAP
AIFDRLSALPGLKMRGVALHIGSQLTSLDPLEAAFARVGRLVAELRAAGHSITHVDLGGG
LGVPYRPEDNPPTPAEYGAMVARVTKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGAVS
PFVIVDAAMNDLARPALYDAYHDFVAVRPTGEKMTASIVGPVCETGDTFARDRVIDKVAA
GDLAAFRTAGAYGATMASTYNSRSLVPEVLVDGDRYVTVADRIAAGTIMAAERVPDWID
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggatcattttgaatatcgtgacggcgtcctccacgccgaagacatcccgctgccgcaa
attgccgaggagatcggcacccccgtctatgtctattcgcgcgcgacgctcgaacgccat
gcacaggtgttcgccgacgcgctcaaggatattccgaaaaagcacatcgccttcgcgatc
aagtgcaaccccaatctcggcgtgctgcgtgtcctcgcgcggcagggttatggcgccgac
gtcgtttcgggcggcgagctcgaacgtgcgctcgccgcgggcatggcggccgaggacatc
gtcttttcgggcgtcggcaagacgcgcgccgaactggcgctcggcctcgaccgcggcatc
gggcagttcaatatcgagcacgagcccgaaggcgtcgcgctgtccgaaatcgcggtgggg
aaggagacgaccgcgcgcgccgtgctgcgcgtcaatcccgacgtcgacgccggcacgcac
gccaagatttcgaccggcaaggccgaaaacaagttcggcgtcggcatcgatgccgcgccc
gcgatcttcgaccggctttcggcgctgccggggctcaagatgcgtggggtggcgctccat
atcggcagccagctcaccagcctcgatccgctcgaggccgcgttcgcgcgcgtcggccgc
ctcgtcgccgagctgcgcgccgcggggcacagcatcacccatgtcgatctcggcggcggc
ctcggcgtgccctatcggcccgaggataatcccccgacccccgccgaatatggcgcgatg
gtcgcgcgcgtgacaaaggattgggacgtcaccctgatgttcgagcccggccgcgtcatc
gcgggcaacaccggggtgctcttgaccgaagtgctgtgggtcaagccaggcgcggtaagc
cccttcgtcatcgtcgacgccgcgatgaacgatctcgcgcgcccggcgctctacgatgcg
tatcacgacttcgtcgcggtccggcccacgggcgaaaaaatgaccgcgtcgatcgtcggc
ccggtgtgcgagacgggcgataccttcgcgcgcgaccgggtgatcgacaaggtggcggcg
ggcgatctcgccgccttccgcaccgcgggcgcctatggcgcgacgatggcgtcgacctac
aacagccgcagcctcgtccccgaagtgctcgtcgacggcgaccgctacgtcaccgtcgcc
gaccgcatcgccgcgggtacgatcatggcggcggagcgcgtgccggattggatcgactga

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