Sphingopyxis sp. FD7: SPYCA_2435
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Entry
SPYCA_2435 CDS
T10393
Name
(GenBank) PAS/PAC sensor-containing diguanylate cyclase
Organism
spfd Sphingopyxis sp. FD7
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
BBB13177
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Position
2562819..2565173
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AA seq
784 aa
AA seq
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MKSLPTDPTAADVIPARTLLGLGPRGQDLGNLRQLQLAPLRGRGALRLSMGLGMALVAFV
TMLHHVALPVAGGWLGASLFFSLWSWRRFRGLPLGDPKLPGSVEYRLCNRHALYSALLWG
APFWLQGLTPGIDHILSMWTIAVLMMLTLAIVAHSVPLACTLFIMPVSLSAAAALGLAGA
PEIGAVTLVAGILLSGFCVRFAQIHIRSRRAEETLHEKSETVSLLLREFEETSADWLWQT
DSNRRLVHVSPRLAYALGSSADRLEGVPLLQALSGDAWDTGLFPKSLHDMAERMKRRESF
SNLIVPVSIGGRPRWWELSASPRLDESGKFLGFRGVGSDVTEQRATAEQIARMARFDNLT
GLPNRLSLNEDLARALARAVEAKSRCALLMIDLDRFKAVNDTLGHPVGDKLLAQVAARLK
ALMERGMTCGRLGGDEFAVVLHNVASGAAAEDLAQRIIATISRPYVVDNHQLFVGASVGY
AIGPTDGATVETLTRNADLALYKSKDRGGNVVAAYVASLHAQAEERRVMEQELRGALERG
EFELYYQPVVTAADGTLNGFEALLRWTNQKLGNVSPGRFIPLAEDARLISPIGEWVLRTA
CREAMKWPSNLKVAINVSADQLTDPSFASVVVSALAQSGLPPQRLEIEVTESVFLRDGGG
AAQLLDQLIALGIRLSLDDFGTGYSSLGYLRKTQFSTIKVDRSFVVGAAKGSIESIAIIR
AVVALADSLGMSTTAEGAETELEVETLRSFGCSNIQGYYYGRPMPASDVLTLFRRPDDVA
TAAA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagcctgccgaccgatccgactgccgccgacgtcatacccgcgcgcaccctgctg
gggctggggccgcggggtcaggatctcggcaacctccgtcagctccaactcgcgccgctt
cgtggccgcggcgcgctgcggctcagcatggggctcggcatggcgctcgtcgcctttgtg
acgatgcttcaccatgtcgcgctgccggtcgccggcggctggctcggtgcatcgcttttc
ttcagcctctggtcgtggcgccggtttcgcggtctgccgctcggcgatcccaagctgccg
gggagcgtcgaataccggctgtgcaatcgccacgcgctttattcggcgctgctctggggg
gcgcccttctggcttcaggggctcacccccggcatcgaccatatcctgtcgatgtggacg
atcgcggtgctgatgatgctcacgctggcgatcgtcgcgcacagcgttccgctggcctgc
accctgttcatcatgcccgtttcgctgtccgcggcggcggcgctcggattggccggggcg
ccggaaatcggcgcggtcacgcttgtcgcaggcattctgctttcgggcttctgcgtccgt
tttgcgcaaatccacatccgttcgcgccgcgccgaggagacgctgcacgaaaagagcgaa
acggtcagcctgctgctgcgcgagttcgaggaaacctcggccgactggctgtggcagacc
gacagcaaccgccgcctcgtccatgtttcgccgcgcctcgcctatgcgctcggcagcagc
gccgaccggctcgaaggcgtgccgctgctccaggcgctgtcgggcgatgcgtgggacacc
ggactgttccccaagagcctgcacgacatggccgaacggatgaagcggcgcgaaagcttc
tcgaacctgatcgtgccggtgtcgatcggtggccgcccgcgctggtgggaattgtcggcg
tcgccgcgcctcgacgaatcgggcaagttcctcggctttcgcggggtcgggtccgacgtc
accgaacagcgcgcaaccgccgaacagattgcaagaatggcgcgcttcgacaatcttacg
ggcctgcccaaccggctcagcctcaacgaggatctggcccgcgcgctcgcccgcgccgtc
gaggccaaatcgcgctgcgccctgctgatgatcgacctcgatcgcttcaaggcggtcaac
gatacgctgggccaccccgtcggcgacaaattgctggcgcaggtcgcggcgcggctgaag
gccttgatggagcgcggcatgacctgcggccgcctcggcggcgacgaatttgccgttgtg
ctccacaatgtcgcctccggcgcggccgccgaagacctcgcgcagcggatcatcgcgacg
atcagccggccctatgtcgtcgacaatcaccagctgttcgtcggcgccagcgtcggttat
gcgatcggcccgaccgacggcgcgacggtcgagacgctgacgcgcaacgccgaccttgcg
ctttataaatcaaaggatcgcggcgggaatgtcgtcgccgcctatgtcgcctcgctccac
gcccaggccgaggaacggcgcgtcatggaacaggaattgcgcggcgcgctcgaacgcggc
gagttcgagctttattaccagcccgtcgtcaccgccgccgacggtacgctcaatggattc
gaggcgctgctccgctggaccaaccagaagctcggcaatgtctcgccgggccgtttcatc
ccgctcgccgaggatgcgcgcctcatctcgccgatcggtgaatgggtgctgcgcaccgca
tgccgcgaggcgatgaaatggccgtcgaacctgaaggtcgcgatcaacgtgtcggccgac
cagctcaccgaccccagcttcgcgtcggtcgtcgtctcggcactcgcgcagagcggactc
ccgccgcaaaggctggagatcgaggttaccgaaagcgtcttcctgcgcgacggcgggggc
gccgcgcaattgctcgaccagctcatcgcgctcggcatccgcctgtcgctcgacgatttc
ggcaccggctattcgtcgctcggctatttgcgcaagacgcaattctcgacgatcaaggtc
gaccgcagcttcgtcgtcggcgccgccaagggcagcatcgaatcgatcgcgatcatccgc
gccgtcgtcgcgctcgccgacagcctcggcatgtcgaccaccgccgagggcgccgaaacc
gaactggaggtcgaaacgctgcgcagcttcggctgctcgaacatccagggctattattac
gggcgcccgatgcccgcgagcgacgtgctgacgctgttccgccgccccgacgatgtggcg
acggctgcggcgtaa
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