Sphingopyxis sp. FD7: SPYCA_2605
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Entry
SPYCA_2605 CDS
T10393
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_2605
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_2605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBB13347
LinkDB
All DBs
Position
complement(2733049..2735859)
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AA seq
936 aa
AA seq
DB search
MRSVRTLTRLACGASLAVLAASPTWAQDAATGDEAVASEDEIIVTGFRASLDKALDVKRE
SVAAVDAIVAEDIAKFPDQNLAESLQRIPGITIQRDGGEGRAITVRGLGSQFTRVRVNGL
ETVATSTDGASANRDRAFDFNVFASELFTSIVVHKTASAELDEGSLGAVVDLNTGNPLGG
RSGFSGALSAQGSYNDLSDKVGPRVAGLLSWVNDAGTFGVSVSAAYSDQKTLELGNNTVR
WAQARFDSVDGTPCFTTANSGGTYVPSAACDEVALAFHPRIPRYGEIAHDKQRLGLTGSV
QFAPTDATKISLDALYSKFKHQRREQWAEVLLRSNERSINVSDYEIDANNNLISATLDDA
WVRTEHYLRKAETEFYQIGGSWDQDVGDSFRFTLLGGMSKSTASIPLETTIVFDDRDAQD
YRYDYSDMGSPLLSFGTSVTDPANFQLAEIRDRPSEVENKFRTVQLRTEWDVSEDFTVKA
GGVYRRFDFASVAFTRDTVVCGNGGVDRVLGTITCSPSSAFGPSAVYGFAVTPALSQLFQ
LGKAGQPAGTTTEWLVPNLDAATDFTGLYNRTPALDAGNNRSVREEVKGAYLQFDAKGEL
GGLRYALNAGVRYVHTDQTSSGLSSGTAVTVERGYEDWLPSMNLALFPHDDIIIRAAVAD
VMTRPTLGNLTPGGSVDGFNYRINYGNPFLDPFRATAYDLAFEWYFAPQSIFSVALFKKD
VASFPVSTTSSGTFASTGLPLSIIPPSSPAAINPEGQLWTINSIGNGEGASLKGVEVSLQ
APFKFLPGFLSNFGGIVNATFVDSDADYRVSGPAIVPGGGLQGTTRTSTLFGLSKRAFNG
TLYYDDGKFSARGSISYRSRYVDSNSGTGNIFEGYGSTINVDASMRYAITENIEISVEGI
NLTDEYRYRFTDFDADRNYENNHFGRTFLFGARVKI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcgttcgcactttgacccgtctggcgtgcggggcctcgcttgccgtgctggcg
gcgtcgccgacctgggcgcaggatgcggccaccggcgatgaagcggttgcgagcgaagac
gagatcatcgtcaccggcttccgcgcctcgctcgacaaggcgctcgacgtgaagcgcgaa
tcggtcgctgcggtcgatgcgatcgttgccgaagacatcgccaaattcccggaccagaac
ctcgccgaatcgcttcagcgcattcccggcatcacgatccagcgcgacggcggtgaaggc
cgtgcgatcacggtgcgcgggctcggttcgcaattcacgcgcgttcgcgtcaacgggctc
gaaaccgtcgcaacctcgaccgatggcgcgtcggcgaaccgcgaccgcgccttcgacttc
aacgtctttgcgtcggagctgttcacctcgatcgtcgtccacaagaccgcctcggccgag
ctcgacgaaggctcgctcggtgccgtcgtcgacctcaacacgggcaatccgctcggcggc
cgttcgggcttctcgggcgcattgtcggcgcagggcagctataacgacctgtcggacaag
gtgggcccacgcgtcgccgggctgctcagctgggtcaatgatgcgggcaccttcggcgtc
tcggtctcggcggcctattcggaccagaagacgctggaactcggcaataacacggttcgc
tgggcgcaggcgcgtttcgattcggtcgatggcacgccttgcttcaccaccgccaattcg
ggcggcacctatgtgccgagcgccgcttgcgacgaggtcgcgctggcgttccatccgcgc
attccgcgctatggcgaaatcgcccacgacaagcagcggctgggtctgaccggatcggtg
cagttcgcgccgaccgatgcgaccaagatttcgctcgacgcgctctattcgaagttcaag
caccagcgccgcgaacaatgggccgaagtgctgctgcgcagcaacgaacgctcgatcaac
gtcagcgattatgagatcgacgcgaacaacaacctgatttcggcaacgctcgacgatgcc
tgggtgcgcaccgaacattatctgcgcaaggccgaaaccgaattctatcagatcggcggc
agctgggaccaggacgtcggggacagcttccgcttcaccctgctcggcggcatgtcgaag
tcgaccgcgtcgatcccgctcgaaacgacgatcgttttcgacgatcgcgacgcgcaggat
tatcgctatgactatagcgacatgggcagcccgctgctcagcttcggcaccagcgtcacc
gatccggccaatttccagctcgccgaaatccgcgaccgcccgtcggaggtcgaaaacaag
ttccgcaccgtccagctgcgcaccgaatgggacgtcagcgaggatttcaccgtcaaggcg
gggggcgtctatcgccgcttcgacttcgcgagcgtcgccttcacgcgcgatacggtggtg
tgcggcaatggcggcgtcgatcgtgtgctcggcacgatcacctgttcgccgtcgagcgcg
ttcggcccgtcggccgtctatggctttgcggtaactccggcgctttcgcagctgttccag
ctcggcaaggcgggacaaccggcggggacgacgaccgaatggctcgtgcccaatctcgac
gccgcgaccgatttcaccggtctgtacaatcgcaccccggcgcttgacgccggcaataac
cgctcggtgcgtgaagaggtgaagggcgcctatctgcaattcgatgcgaagggcgaactc
ggcgggctgcgctatgcgctcaacgccggggtgcgttatgtccacaccgaccagacgtcg
agcggtctttccagcggcacggccgtgacggtcgagcgcggctatgaggactggctgccg
tcgatgaaccttgcgctgttcccgcacgacgacataatcatccgcgcggcggtcgccgat
gtgatgacgcgcccgacgcttggcaatctgacccccggcggatcggtcgacgggttcaac
tatcgcatcaattacggcaaccccttcctcgacccgttccgtgcgaccgcctatgatctt
gcgttcgaatggtatttcgcgccgcagtcgatcttttcggtcgcgctgttcaagaaggat
gtcgcgagcttcccggtttcgacgacgtcgagcggcactttcgcctcgaccggactgccg
ctgtcgatcatcccgccgagcagtcccgccgcgatcaatccggaagggcagctgtggacg
atcaattcgatcggtaatggcgaaggcgcgagcctcaagggcgtcgaggtgtcgctgcag
gcgccgttcaagttcctgccgggcttcctgtccaatttcggcgggatcgtgaacgctacc
tttgtcgattccgatgccgactatcgcgtcagcggcccggcgatcgtccccggcggcggc
cttcagggcaccacccgcaccagcacattgttcggcctgtcgaagcgcgcattcaacggt
acgctctactatgacgacggcaagttcagcgcacgcggctcgatcagctaccgcagccgc
tatgtcgactccaacagtggcaccggcaatatattcgaaggctatggctcgacgatcaac
gtcgatgcgtcgatgcgctatgcgatcaccgagaatatcgagatttcggtcgaagggatc
aatctgaccgacgaatatcggtatcgtttcaccgatttcgatgccgaccgcaattatgag
aataaccacttcggccgcaccttcctcttcggtgcgcgcgtgaaaatctga
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