Sphingopyxis sp. FD7: SPYCA_3088
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Entry
SPYCA_3088 CDS
T10393
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spfd03016
]
SPYCA_3088 (trmE)
Transfer RNA biogenesis [BR:
spfd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SPYCA_3088 (trmE)
Prokaryotic type
Methyltransferases
SPYCA_3088 (trmE)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AAA_28
Dynamin_N
ABC_tran
AAA_25
AAA_18
RsgA_GTPase
nSTAND3
RuvB_N
AAA_29
Guanylate_kin
Arf
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBB13830
UniProt:
A0A2Z5USE6
LinkDB
All DBs
Position
complement(3171128..3172408)
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AA seq
426 aa
AA seq
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MPPAAIAVVRISGVDAAKALQALAGRLPVPRQASLARLTDPDGGALDHALILWFPGPATA
TGEDLAELHLHGGRAVVAAVEAVLAAMPGLRRAAPGEFTRRAFENGRIDLAEAEGLADLL
AAETESQRVQALGHASGHVSRAVADWQERLLGLMAGAEAELNFADEDDVEVGEVVAQRVR
GGMAALAEELGKWLARPAAEVISEGLSVVIAGPPNAGKSTLINVLAKRELAIVSPVAGTT
RDVIETPLALDGIAMRFSDTAGLRGEADAIEAIGIDRAKAAVEAADILLWLGPPKEAPHH
PRTILIAAQADRWRGDAAAEAEAARCDLILSAATGEGMDRLHHMIVEMARTLLPREGEAA
LRQRQRAALADAKQWLAIDPESREASDLILLAERLRLAATSLDRITGRAGVEDMLDTLFG
RFCIGK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccgcgatcgcggtcgtgcggatcagcggggtcgatgccgccaaggcgttg
caggcgttggcagggcgactgccggtgccccgacaagcttcactcgccaggttgacggac
cccgacggcggggcgctcgatcatgcgctgatcctctggtttccggggccggcgaccgcg
accggcgaagacctcgccgaactgcacctgcacggcgggcgcgcggtggtcgcggcggtg
gaggcggtgctggcggccatgccgggattaaggcgcgctgcgccgggcgagtttacgcgg
cgggcgttcgagaatggacggatcgaccttgccgaggccgaaggactggctgacctgctc
gcggccgaaaccgaaagccagcgggtgcaggcgctgggccatgcgagcgggcatgtatcg
cgcgcggtggcggactggcaggagcggctgctcggattgatggcgggcgccgaggccgag
ctcaatttcgccgacgaagacgacgtcgaagttggcgaagttgtggcgcagcgggtgcgg
ggggggatggcagcgctggcggaggagctggggaagtggctggcgcggccggcggccgag
gtgatatcggaggggctgtcggtggtgatcgcaggaccgccaaatgccggtaaatctact
cttatcaatgtcttggcaaaaagggagctggcgatcgtgtcgccggtcgcggggacgacg
cgcgacgtgatcgaaacgccgctggcgctggatgggatcgcgatgcgcttttcggatacc
gcaggactgcgcggtgaggccgacgctatcgaggcgatcgggatcgatcgcgcgaaggcg
gcggtcgaggcggccgatatattgctgtggctcgggccgccgaaggaagcgcctcaccac
ccgcgcacgatcctgatcgcggcgcaggccgaccgctggcgcggcgacgcggcggccgaa
gccgaggctgcgcgctgcgaccttatcctgtcggcggcgacaggcgaagggatggacagg
ctgcatcacatgatcgtcgaaatggcacggacgctgttgccgcgcgagggcgaagcggca
ctgcgccaacgccagcgcgccgcacttgccgacgcaaagcaatggcttgcgatcgatccc
gagtcgcgcgaggccagcgacctgatcctgctcgccgagcgcctccggctcgccgcgact
tcgctcgaccgcatcacggggcgcgccggggtcgaggatatgctcgacacgctgtttggg
cgattctgcatcggaaaatga
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