KEGG   Sphingopyxis sp. FD7: SPYCA_3413
Entry
SPYCA_3413        CDS       T10393                                 
Symbol
vapC
Name
(GenBank) ribonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
spfd  Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:spfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spfd03016]
    SPYCA_3413 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spfd02048]
    SPYCA_3413 (vapC)
Transfer RNA biogenesis [BR:spfd03016]
 Prokaryotic type
  tRNA degradation factors
   SPYCA_3413 (vapC)
Prokaryotic defense system [BR:spfd02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    SPYCA_3413 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: BBB14155
UniProt: A0A2Z5USP6
LinkDB
Position
3507716..3508096
AA seq 126 aa
MTRYLIDADCAVYAMTARFEPLRERLTACAPGDVAISTISFAEVALGTENGKPPSPEILE
AFIAAIPLVAFDEAAAREYARLPFKRARFDRLLAAHALSLGVTIITNNQADFADVPGLRV
ENWTQP
NT seq 381 nt   +upstreamnt  +downstreamnt
gtgacgcgctatctgatcgatgccgattgcgcggtctatgcgatgaccgcgcgcttcgag
ccgctgcgtgagcgacttaccgcttgcgctccgggcgacgtcgccatttcgacgatcagt
tttgccgaagttgcgctgggaaccgaaaatggcaagccgccgtcaccggagattctggaa
gcctttattgccgccatcccgctcgttgccttcgacgaagcggcggcacgcgaatatgca
cggcttccattcaagcgggcgcgttttgatcgcttgctcgccgcccatgcgttgagcctc
ggggtaacgattattacgaataaccaggccgacttcgccgatgtgccgggacttcgggtc
gaaaattggacccagccttga

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