Sphingopyxis sp. FD7: SPYCA_3420
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Entry
SPYCA_3420 CDS
T10393
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPYCA_3420 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spfd01007
]
SPYCA_3420 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spfd03016
]
SPYCA_3420 (hisS)
Enzymes [BR:
spfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SPYCA_3420 (hisS)
Amino acid related enzymes [BR:
spfd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SPYCA_3420 (hisS)
Transfer RNA biogenesis [BR:
spfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPYCA_3420 (hisS)
Prokaryotic type
SPYCA_3420 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBB14162
UniProt:
A0A2Z5V0V8
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All DBs
Position
3513296..3514591
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AA seq
431 aa
AA seq
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MSKDKPAKIPTPQPVRGTQDMLGDFADRFAHVVETFERVRRLYGFRRIEVPVIEPTAVFA
RSLGETTDVVSKEMYSFDDRGGESVTLRPEFTAGIARAYITNGWQQFAPLKVATHGPLFR
YERPQKGRYRQFHQLDAEVLGSDSPLADAELLVFADQLLKELGIAEGVTLTLNTLGDAES
RDAWRAALVEHFMAHRGDLSEDSLARLDKNPLRILDSKDPRDRPIADSAPDIDAYLTSEA
QDFFGAVTAGLDAAEVAWERNARLVRGLDYYRHTAFEFVTDRLGAQGTVLGGGRYDGLIE
NLGGPPTPAVGWAAGIERLAMLVESGPVEPLIAVIPDNPTLEGDAINIAYRLRQQGFRTT
IAYRGKAKRQVEIARKVGADAALYVRPQPDDGSSRYHLTELKPDPDRAFLGRVLQAIGPG
VGGVSGGGSGF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacaaacccgccaaaatcccgacgccgcagccggtgcgcggcacgcaggac
atgctcggcgatttcgccgaccgtttcgcgcatgtcgtcgagacattcgagcgcgtgcgc
cgcctctatggcttcaggcggatcgaggtgccggtgatcgagccgaccgcggtgttcgcg
cggtccctgggtgaaaccaccgacgtcgtgtcgaaggaaatgtattcgttcgacgatcgc
ggcggcgaatcggtgacgctgcgccccgaattcacagcggggatcgcacgcgcctatatc
acgaacggctggcagcagttcgcgccgctgaaggtcgcgacgcacggcccgctgttccgc
tacgagcggccgcagaaggggcgttatcgccagttccaccagctcgacgccgaagtgctg
ggcagcgacagcccgctcgccgatgccgagctgctggtgttcgccgaccagctgctgaag
gaattggggatcgccgagggcgtgaccttgacgctcaacacgctcggcgacgccgaaagc
cgcgacgcctggcgtgcggcgctggtcgagcatttcatggcgcatcgtggcgatctgtcc
gaagacagcctcgcgcggctcgacaagaatccgctgcggatattggacagcaaagacccg
cgcgaccgcccgatcgccgacagcgcgcccgacatcgacgcgtatctgacgagcgaagcg
caggatttcttcggcgccgtcaccgcggggctcgacgccgcggaggtcgcgtgggaacgc
aacgcgcggctggtgcgcgggctcgactattatcgccacaccgcgttcgagttcgtcacc
gaccggctgggcgcgcagggcacggtgctcggcggcggacgctatgacgggctgatcgaa
aatcttggcggcccgccgaccccggcggtcggctgggcggcggggatcgagcggctggcg
atgttggtggaaagcggtccggtcgagccgctgatagcggtgattcccgataacccgacg
ctcgaaggcgatgcgatcaatatcgcctatcgcttgcggcaacagggtttcagaacgacg
atcgcttaccgtggcaaggcgaagcgtcaggttgagattgccaggaaggtcggcgctgat
gcggcgctctatgtcaggccgcagccggacgatggttcgtcccgctatcaccttaccgaa
ttgaagcccgaccccgaccgtgcattcctgggccgtgtgctgcaggccattgggcctggc
gtggggggggtgtctggtggaggttcgggattctga
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