Sphingopyxis sp. FD7: SPYCA_3458
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Entry
SPYCA_3458 CDS
T10393
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_3458
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_3458
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2490
Motif
Other DBs
NCBI-ProteinID:
BBB14200
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Position
3563413..3565878
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AA seq
821 aa
AA seq
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MATVMLPSAVFAQSAEGSDGNAQAAAEEDSPFGDIVVTAQKRDQRTQDVGIAIAAFGGDQ
MNALGVVDVKDVAVLVPGFTVAKSFRGPPIYTLRGVGFNTPNMSTSSPVGVYLDEVAYPY
PIMTEGLSLDLERVEVLKGPQGTLYGRNTTGGLINSIGNKPTDERSGEIKVSYGSYQSYG
LEGFINGGIAPNLNARLAFDVQRADKGWQVSVTHGERLGKVDKAAARFSLAWEPADDTKF
LFTTSWWKDKSDTQAGQSIAVFPRGLIAFLGLTTPAQWAAAAPGLGLPPEIFSQSYTPTS
GSQANWVVQNLPWGGTNGGGQNFTPAPLDFRKDNELLAFALRGDIGIADGVKLTSLTSYA
HFTRREGYDTSGWDIENLIGLGEGSIKSFSQEFRLSGDSDRLHWVAGAFYARDKIRENDK
TWGATISTVALVRTFGQLTSPPGTTVAQLEDIQWGFRDWENLINQTITSKALFGQVEYKF
TDQFNVTFGMRYSKDKAEFAGCSKDQGDNSIAASWNAFFNNATPFGANVQPGGCVTYLAD
LVPGGNNVQGVVRKVLDEDNLSGRIALDYHLNNNVLVYVSAARGFKSGAFPNVNANVAPQ
YDPAKQEEVRAYEAGIKASPARGVILNASTFYYDYRDKQLFVNTPDPVYVTLNSIKNIPK
SHVFGIEGEVSVPLFRGLDARVTATYLDAKIDTYQGFNDFGQARNFAGASFPFTPKFQLN
GTLTYGFDVGDSLNARLTVNGRYSSSSRGDLEGDPLFKIDSYALFDANLAVMTNDDQYQL
DVFVRNIGNKYYWNSVQLPLDSLVRYAGMPRTWGVSLKAKF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgtgatgctgccgtctgccgttttcgcgcagagtgcagagggcagcgatggc
aatgcacaggcggccgccgaagaagattccccgttcggcgacatcgtggttacggcccag
aagcgtgatcagaggacgcaggatgtcggcatcgcgattgccgcgttcggtggcgatcag
atgaatgctttgggcgtcgtggacgtcaaggatgtcgcagtcctcgtgcctggttttacg
gtcgccaaatcgtttcgcgggccgccgatctatactctgcgaggtgtcggcttcaacacg
ccgaacatgtcgacgtcttcgccggttggcgtctacctcgacgaagttgcgtatccctat
ccgatcatgaccgaaggtctgtcgctggaccttgaacgcgtcgaagtgttgaaaggtccc
caagggaccctgtatggccggaacacaaccggcggcctcatcaacagcatcggcaacaag
ccgaccgatgagcgaagcggtgagatcaaggtctcatacggcagctatcaatcatatggc
ctcgaaggtttcatcaatggcggtatcgctcccaatctgaacgcacgccttgccttcgat
gtgcagcgggcggacaagggctggcaggtcagcgttacccatggagagcgtctcggcaaa
gttgacaaggcggcagcgcgcttttctctcgcatgggaacctgcggacgataccaagttc
ctgtttacgacaagctggtggaaggacaaatcagacacgcaggctggtcaatcgattgcc
gtatttccaagaggtctcatcgcatttcttgggctaaccactccggcgcagtgggctgct
gcggcgccaggccttggcttgccgccggagatcttcagtcagtcgtataccccgaccagt
ggcagtcaggccaactgggtggttcagaaccttccctggggcggcaccaatggcggagga
cagaatttcacgcccgccccgctcgatttccgcaaggataacgagcttctggccttcgca
ctgcgtggtgacatcgggatcgccgatggcgtcaagctgacttcgctgaccagctatgcg
catttcaccaggcgtgaaggctatgacaccagcggctgggatatcgagaacctgattggt
ctcggtgaaggttcgatcaagtccttctcccaggagttcaggctcagtggcgactcggac
cgcctgcattgggtcgcgggtgccttctatgcgagggacaagatccgtgagaacgacaag
acctggggtgcgacaatcagcacggtcgcattggtcaggactttcggacagctgacatcg
cctcccggcaccacggttgctcagctggaagatatccaatggggcttccgcgattgggaa
aacctgatcaatcagacgatcacgtccaaggcgttgttcggacaggttgagtacaagttc
accgatcagttcaacgtcaccttcggtatgcgctattcgaaggacaaggccgaatttgcc
ggttgttcgaaggaccagggtgacaacagcatcgctgcctcctggaatgcattcttcaac
aatgcgacgccgttcggagccaacgtacagcctggtggctgcgtcacctacctcgccgat
ctcgtgccgggcggcaacaacgtccagggcgtggttcggaaggttctcgacgaagacaac
ctgtccggtcgcatcgcgcttgactatcacctcaataacaatgtgctcgtctatgtctcg
gccgcgcgcggcttcaagtcgggcgcatttcccaatgtcaacgcgaacgtcgccccgcag
tatgatcctgccaagcaggaagaagtgcgggcatacgaagccggcatcaaggcgagccct
gcccgtggcgtaatcctgaatgcttcgacgttctactatgattatcgcgacaagcagctt
ttcgtgaatacgcctgacccggtctatgtgacgctgaacagcatcaagaatattccaaaa
tctcatgtcttcggcattgaaggggaggtgtcggtaccgctgttccgtggcctggacgct
cgcgtgactgcaacttatcttgatgcgaagattgacacctatcagggcttcaacgacttc
gggcaggcacggaacttcgcgggtgcaagcttccccttcacccccaagttccagctgaat
ggcacgttgacctacgggttcgacgtcggtgacagcctgaatgcccgccttaccgtgaac
ggacgatattccagctcgtcacggggcgatcttgaaggtgatcccctgttcaagatcgac
agctatgcgttgttcgatgccaatctggcggtcatgaccaatgacgatcagtaccagctc
gacgtcttcgtgcgcaatatcggaaacaagtactactggaatagcgtccagctgcctctg
gacagtctggttcggtacgcgggcatgccccgcacttggggagtttcgctcaaggcgaag
ttctga
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