Sphingopyxis sp. FD7: SPYCA_3473
Help
Entry
SPYCA_3473 CDS
T10393
Name
(GenBank) sigma54-dependent activator protein
Organism
spfd Sphingopyxis sp. FD7
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
V4R
AAA_5
AAA_2
Mg_chelatase
AAA_22
HTH_28
HTH_29
MCM
AAA
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BBB14215
LinkDB
All DBs
Position
complement(3580968..3582662)
Genome browser
AA seq
564 aa
AA seq
DB search
MADENLIEQFDLLNKLRIDFTRGDIWLEESRMLLLHASALAELRKELYESLGENRTRSLL
FRTGYSAGQRDAELAHKMLGSGDPMDVFKIGPELYSFEGNGKAEIVSSEIDWKEGIFRGE
VVRSASWEAESYIQQFGQSEGPVCWSLAGHASGYTSRFLRRYIVFREVECVGKGDSCCRF
VGKPAEDWHDHRDDFGPEDPTTSAMESELDRLRSAEISRSHDEKCDLVGNSQAFRSAFEQ
LKIAAASPINVLLLGESGVGKEVFARWLHDNSERKSEPFVAVNCAAIPMDLIESELFGVR
KGAYTGATLDRAGRFERASGGTILLDEIGDLPLSAQVKLLRVIQNGEVDRLGDSTTSKVD
VRILAATNVDLKKAVDEGRFRLDLYYRLSTFTVTIPPLRERRSDIPLLVSELVERLSKRY
RKSLRGMSDRAMDALMTHRFPGNVRELENLIERGVLLAMPDTWIELEHLFAGGILPDPEG
LLLDSKGQFRMDSSPALQMAYARIFDADLPLEAHERALFELALRRSKGNKSQAARRLGLS
RRQFTYKWKAITGSECNTPQDSYH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaaacctgatcgagcaattcgacctcctcaacaaactacggattgacttc
actcgcggcgatatctggctggaggaaagccggatgctgctgctgcacgcgagcgccctg
gcggaactgcgcaaggaactatacgagtcgctcggtgaaaaccgcacccgaagcctcctg
ttcagaactggctacagcgccggacagcgcgatgccgaactcgcccacaagatgctcggc
agcggtgatccgatggatgttttcaagatcggaccggagctctattcgttcgaaggcaat
ggcaaggccgaaatcgtcagcagtgagatagactggaaggaagggatcttccgcggcgaa
gttgtgcggtctgcgtcatgggaagcggaatcatacattcagcaattcggacagagtgag
gggccggtctgctggtctctcgccggtcacgcttcaggctacaccagccgcttcttgcgc
aggtatattgtattccgtgaagtggaatgtgtgggaaaaggcgacagttgctgcaggttc
gtcggaaagccagccgaagattggcacgatcaccgcgatgattttggaccggaagaccca
acaacttcagcaatggaaagtgaactcgatcgcctgagaagcgcggaaatatcccgttcg
cacgacgaaaagtgcgatctcgttggcaattcgcaagctttccgatcagcatttgagcag
ctcaagatcgctgcggccagtcccatcaatgtcctcttgctgggagaatccggggtaggg
aaggaagtttttgctcgctggcttcacgacaacagcgagaggaagagcgaaccctttgtg
gcggtcaattgcgcggcaatccccatggaccttatcgaatccgaactgttcggcgtacgg
aagggtgcctataccggtgcaacgctggaccgtgcaggaaggttcgagcgcgcaagtggc
ggcactatcctgctcgacgaaatcggtgatctgcctttgtcagcgcaagtgaaactgctt
cgggtcatccagaacggcgaggttgaccgtctaggcgatagtacgaccagcaaggttgac
gtccggatcctggctgcaaccaacgtcgacctgaaaaaggccgtcgatgaaggccgcttc
agactggatctctactaccgtctatcgacctttacagtgacgattcccccgcttcgagaa
agacgtagtgatattccgttgctcgtctcagaattggttgagcgcctttccaagcgctat
cgcaagtctttgcgtggcatgtccgatcgcgccatggacgccctcatgacgcacaggttt
ccgggcaatgttcgagagctcgagaatctgatcgagcgcggagtcctgcttgccatgccg
gacacctggatcgaactcgaacacctcttcgccggagggatccttcctgatccagaaggc
ttgcttctagacagcaaagggcagttccgcatggactccagccctgcgttgcaaatggcc
tacgctcgaattttcgatgcagaccttccactggaagcccatgagcgtgcgctgttcgag
ctagccctgcgccgctcgaaaggcaacaagtcgcaggctgcccgccgcctggggctttcc
aggcggcagttcacttacaagtggaaggcaatcaccggtagtgaatgcaacacgccgcag
gattcataccactga
DBGET
integrated database retrieval system
