Sphingopyxis sp. FD7: SPYCA_3524
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Entry
SPYCA_3524 CDS
T10393
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spfd03036
]
SPYCA_3524
Chromosome and associated proteins [BR:
spfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCA_3524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
BBB14266
LinkDB
All DBs
Position
complement(3632575..3636912)
Genome browser
AA seq
1445 aa
AA seq
DB search
MTNSLAAGAFVRPLSVQCPEQTAASIILAAYDLLGHFAAGRRIDTPAIRTAMQSAFGASD
AAGAWDWKAAYEAVEVAQLLFLRRYGPAINSRTSDPFEQLKLVERIARLAPTQTRRSEEM
QAYQQFSTPLGLAWVAGFAAGFVPGELVLEPSAGTGLLVIQAELGASRLALNEVADVRAA
LLRQLFYTATVTTHDAAQIHDRLDPGILPSCIVMNPPFSAAVGVETRVADAAFRHLSSAV
VRLAPGGRLVAITGANCSPEHRAWRDGFVRLQEQVRVVFTAPIAGSIFAPHGTSIETRLT
VIDKLPAAEPTSFPAPPGTAPDLATLLHWLIDRLPPRAIPAAQQTPALRPAASRRVAAPR
PRLAVAHPAEPTGVLLDYEVADWTDEVSARLSETLYEPYTLQSLRIPGAQPHPTKLVQSA
AMASVAPPKPSYRPHLPNALVEQGLLSDAQLESVIYAGEAHSQHLAGSWTVDATFDKVEA
APDDSDTAVRFRKGWFLGDGTGAGKGRQVAGIILDNWLKGRRRAVWISKSDKLLEDAQRD
WRALGQEPLLVTPLARFRQGTPIRLEQGILFTTYATLRSDAREGRVSRVQQIVDWLGTDF
DGVIVFDESHAMQNAGGGKSERGDAAPSQQGRAGLRLQHALPDARVLYVSATGATTVENR
AYAQRLGLWGGADFPFDKRTDFVAAIEAGGVAAMEVLARDLKALGLYSARSLSYEGVEYE
LLEHQLTPDQVRIYDAYAGAFQIIHNNLDAALEAAGVTSAADGTLNVTAKSAARSAFESA
KQRFFNHLITAMKTPTLIRAIEQGLTDGHASVVQIVSTGEALLSRRLADIDPGEWNDVQC
DVTPREYVLDYLLHSFPTQLHEPFTDGDGNLSSRPAYDGDGNVIQCRDALERRDRLIEQL
AAMEPVQGALDQIVQRFGTDMVAEVTGRSRRIIRKVDSDGTRFAVENRPAHANLAEAQAF
MEDRKHILIFSDAGGTGRSYHADLGSRNQRLRHHYLLEAGWKADTAIQGLGRTNRTNQAQ
PPLFRPVATDVQAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESPYARDALR
QLYMLIYTGKVAGCSLVLFESLTGLSLTDGSGCLKDELPPITTFLNRLLALTIAMQNVLF
TAFEQLLSAKVESAMASGTYDIGLETLTADSFTVAHSETIYTHPSTGAETRLLTIAVRER
NQPVTIDKALALLGEPGARPLVNSRSKRAAVQLPARSLMLDDGEIERRVRLIRPMERLYL
SVAHLPETSWEPADEATFRAVWDAEIAQVPEFDTSELHIVTGLLLPIWKRLPEDSTRVYR
LRTDDGTTIVGRRVSPAWAVNAVSADAPQLTPPQALSLLREGHTVLNLTDGLQLRRSRHC
QVNRIELTGFGPTAVDRLKAMGLFSEIISWKLRLFVPDDTALGSEVIERLFARHPLTRIL
DRKAA
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgaccaactcgcttgctgcgggtgctttcgtgcgcccgctgtccgtccaatgcccggag
caaaccgcagcttcgatcatccttgccgcctatgatctgctcgggcacttcgccgccggt
cgccgcatcgacacgccagccatccgcaccgcgatgcagtcggcattcggcgcgagcgat
gctgccggagcttgggactggaaggctgcctacgaggcggttgaggtcgcgcagttgttg
ttcctgcggcgctatggtccggccatcaattccaggacatccgatccgttcgaacaactc
aaactcgtcgagcggattgcccggctcgccccgacgcaaacccggcgcagcgaggaaatg
caggcctaccagcaattctcgacgccactggggctggcctgggtagctggcttcgcagcg
ggcttcgtccctggcgaactggtgctcgaaccatcggcgggcaccggtttgctcgtcatt
caggccgagcttggcgcgagcaggttggcattgaacgaggtggccgatgtgcgcgccgcg
ctgctacgccagctgttctacaccgcgaccgtcaccacgcacgatgccgcgcagatccac
gaccggctcgatcccggcatcttgccgagctgcatcgtaatgaacccgccgttttctgcc
gccgttggcgtcgagacgcgcgtggcggatgctgcattccgccacctgtcgtcggctgtg
gtgaggctcgcacccggcgggcgtctcgtcgccatcaccggcgcgaactgctcgcccgag
cacagagcgtggcgcgacggattcgtgcggctgcaggaacaagtccgtgtggtgttcacc
gcgccgattgccggctcgatcttcgctccgcacggcacgagcatcgaaacccgtttgacg
gtgatcgacaagctgcccgccgctgagccgacctccttcccggcgcccccgggcaccgcg
cccgacctagcgactctgctgcactggctaatcgatcgcctgccgccccgcgccattccc
gccgcccagcaaactccagccctccggccagccgcatcgcgccgggtagctgcaccacgg
cccagacttgcagtcgcccacccggctgaaccgactggcgtgctgctcgactacgaggtc
gccgactggacagacgaggtatcggcccgcctcagcgaaaccctctacgagccctacacg
ctgcaatccttgcgcattcccggtgcgcagccgcatccaaccaagctggtgcaatccgcc
gccatggcctcggtcgcgccgcccaagccgagctatcgtccacaccttcccaatgctctg
gtcgaacaaggcctgctctcggacgcccaacttgaatcggtgatctatgcaggtgaggcg
catagccagcatttggccggcagttggacggtcgatgcgactttcgacaaggtcgaggcc
gcgccggacgacagcgacactgcggtccgcttccgcaagggctggttccttggcgacggc
accggcgcgggcaagggtcgccaggttgccgggatcatcctcgacaactggctgaagggc
cgccgccgcgcggtgtggatctccaagtcagacaagctgctcgaagacgcccaacgcgat
tggcgggcattggggcaggaaccgttgctggtcaccccgcttgcccgctttcgtcagggc
acgccgatccggcttgagcagggcatcctttttacgacctatgccacgctacgcagcgat
gcgcgtgaaggcagagtttcccgcgtccagcagatcgtcgattggctcggaaccgacttc
gacggggtcattgtcttcgacgaaagccatgcgatgcagaatgccggtggcggcaagagc
gaacgcggggatgcggccccttcacagcagggccgtgctggcctgcgcctgcagcacgct
ctgccggatgcccgggtgctctacgtctccgccaccggcgcgaccacggtcgagaaccgc
gcctatgcgcagcggctcggcctctggggcggcgcggacttccccttcgacaagcgcacc
gatttcgtggcggcaatcgaagccggcggtgtcgcggcgatggaagtgctggcgcgcgac
ctcaaggcgctcggcctctattccgcacggtcgctgtcctacgaaggcgtcgaatatgaa
ctgctcgaacaccagctaaccccggatcaggttcgtatctatgacgcctacgcaggagcg
ttccagatcatccataacaacctagatgccgcgctcgaagccgcgggggtgaccagcgcc
gccgacggcacattgaacgttactgccaagtctgctgcccgttcagcgttcgaaagcgcc
aagcagcgcttcttcaaccacctcatcaccgcgatgaagaccccgacgctgatccgcgcg
atcgagcaggggctcactgatggtcatgcctccgtggtgcagatcgtctcgaccggcgaa
gccctgctgtcgcggcggcttgccgacatcgatccgggcgaatggaacgatgtccagtgc
gacgttacgccacgcgaatatgttttggactatttgctgcacagcttcccgacgcagctc
cacgagccgttcactgatggcgatggcaacctctcgtcacggcctgcctatgacggcgat
ggcaatgtcatccagtgccgcgatgccctcgaacggcgcgatcggctcatcgagcaactg
gcagcgatggaaccggtccagggcgcactcgatcaaatcgtccagcggttcggcaccgat
atggtcgccgaggtcaccggccgctcgcgtcggatcatccgcaaggtcgattcagatggg
acgcgctttgcagtcgagaaccggcccgcccatgccaatctcgccgaggcgcaggcgttc
atggaggacaggaagcatatcctgatcttctctgacgccggcggcaccgggcggagctac
cacgccgatcttggcagccgtaaccagcggttgcggcatcattatctgctcgaagcaggc
tggaaggccgacaccgcaatccaggggctcgggcgcaccaatcgcaccaatcaggcgcag
ccgccgttgttccgcccggtcgccactgacgtccaggcagaaaagcgcttcctctcgacc
atcgcgcggcggctcgacacattgggcgcgatcacgcgggggcaacgccagaccggcggg
caaggcctgttcaggccggaggacaatctcgaaagcccctacgcccgagatgccctgcgc
cagctctatatgctgatctatacgggcaaggtagcagggtgctcgctcgtgcttttcgag
agcctgaccggcctgtcgctgaccgacggcagcggttgcctgaaggacgaactgccgccg
atcaccaccttcctcaaccggctgctcgcgctgaccatcgccatgcagaacgtgcttttc
accgcgttcgagcaattgctctccgccaaggtcgaaagcgcgatggcgagcggcacctac
gacatcgggcttgaaacgctgaccgccgacagcttcacggtcgcgcacagcgagaccatc
tacacccatccgtcgaccggtgctgaaacccgcctgctcacgatcgcggtgcgggagcgc
aatcagccggtgacgattgataaggcgttggcccttttgggcgagcccggcgcgcggccg
ctggtcaactcccgctcgaagcgtgccgccgtgcaattgcctgcccgcagtctgatgctc
gacgatggcgagatcgagcggcgcgtccgcctgatccggccgatggagaggctctatctg
tcagtcgctcatctgccagagaccagctgggaacccgccgacgaggctacgttccgggca
gtgtgggatgcggaaatcgcgcaggttcccgagttcgataccagcgagctgcatatcgtc
accgggctgttgctgcccatctggaagcgactgccggaggattcgacccgcgtctatcgg
ctgcgcactgacgacgggaccaccatcgttggccgccgcgtgtccccggcatgggccgtg
aatgccgtcagcgccgacgcaccgcaactcacgccaccacaagctctgtcgctgctgcgc
gaagggcacaccgtgctcaacctgaccgacggactgcaactgcgccgttcgcgccactgc
caagtgaaccggatcgaactgaccggattcggtccaaccgccgtcgaccggctcaaggcg
atggggctgttttccgaaatcatcagctggaagctgcggctcttcgtgcccgacgacacc
gccctgggcagcgaggtgatcgaacggctgttcgcccgtcatcccctgacccgcatcctc
gaccggaaggctgcctga
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