Sphingopyxis sp. FD7: SPYCA_3686
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Entry
SPYCA_3686 CDS
T10393
Name
(GenBank) hypothetical protein
KO
K26273
protein strawberry notch
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spfd03036
]
SPYCA_3686
Chromosome and associated proteins [BR:
spfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCA_3686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
MTS
Motif
Other DBs
NCBI-ProteinID:
BBB14428
LinkDB
All DBs
Position
pSFD01:107884..112101
Genome browser
AA seq
1405 aa
AA seq
DB search
MTDLFKQSSQKLDAAITEIQHAIATGLANKQRLFETMRQLYGEGSANGAWSQRDAFDLLE
AALTRHMAGLLNKPQMLTQISEISALIEALPTHTVRSEDQIRFQQFSTPADLAALSVILA
QPLATDIVLEPSAGHGALVATLPDVSALHLNEIDPRRREKLALLFPDATITGIDGAMLAS
HLDAAVQPSLILMNPPFSRSMGRGADEFAAVRHLRAAITRLRQGGRIVAIMPDWFTTSAK
LAKIYEDTFASCTVRTSIRLDKCYHKQGTSVAVRLYVIDKIPGQIKPAVLARETVADVAS
AVPIIKRVTAQPDCEPRAAPPKAKPGVLFKAMRATPITKPVKARAAQTPKIEALAFNTLD
KPRVLGEQSGVYIPYRPSRVDIVGAREHPTPLVESVAMGSIPAPIPDYVPALQDRVLQES
LLSEAQIETVIYAGNAWQQYLPGLFVPAEEGVGLQLDEHGRAYRKGYFLGDGTGAGKGRQ
IAACILDGWLAGRRKAIWISKNESLLEDARRDWSAIGGLAADIQPLSNWKIDQAVPFREG
ILFVTYPTLRSQRQDATRLKQLLDWAGEDFDGVIAFDESHEMGGVAGGEGARGTKSGSLQ
GIAGVLLQNNLPDARVLYASATGASEVNNLAYAVRLGLWGPGTAFANREDFISQIRAGGI
AAMELVSRDLKALGLYQARALSFAGVEYDILKHDLTAEQIAVYDTYADAWAIIHQNLEEA
LELTGVVDEIDGTTLNSGAKAAARSRFESTKQRFFNQLLLSMKLPTLIAAINLHLDRDEV
VVVQLVSTAESILDRRLDSLSPEERAELDLDLSPLDAVIEYLERAFPTQQMQVFVDDIGT
QRSAPMFDEEGRPVHNQTAIARRAEMIEHLCAMPPIKPALDGIIEHYGPEKVAEVTGRSK
RLINQSDGQQRLETRSPRTNQSETDQFMDGRKPILVFSDAGGTGRSYHASLDAACQKRRI
HFLLEPGWRADRAIQGLGRTHRTHQANTPLFRPVTTNCKGELRFTSTIARRLDSLGALTR
GQRQTGGQNLFDPADNLESEYAKAALSTWFALLADGKLKSATLIDFQRRSGLKIVSEDGI
LEEDLPPIQRWLNRILALPIGMQNAIFEEFLGLVEARVSAARQAGSLDVGVETLRVEQAE
VVEDIVLRTDGRTGATSHLLQLALKTRARPISLERVLERRNYADGCILLHNTKSGKAAMA
EPSRHFMTEQGELIRRVILHRPLRREYHHFDDLAESAWEEAPSQTFEKLWQSEVAELAER
LTTETVYLATGLLLPIWSSLPIDYLEVRRIVDEEGRSWLGRMVHELDVAKLLEKFDIAST
VELSPDTIIRALSESRIIPIKQPFEATIKGSRVAGEQRYEIVGAPVDQLPWLKSIGCFTE
IISFRTRVFIPKATASSLISALLRV
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacctttttaaacaatccagccagaagctggacgcagcaatcaccgaaatccag
cacgccatcgccaccggactggcgaacaagcaacgcctgtttgagacgatgcgccagctc
tacggggagggctccgcaaacggcgcctggagccagagggacgcttttgacctgctcgag
gcggccttgacgcgccacatggccggactgctgaacaaacctcagatgctgacccagatt
tcggagatcagtgcgcttatcgaggcactgccgacacacacggtcagaagtgaagaccag
atcaggttccagcaattctcgacgcccgcagacctcgcagcgctatccgtgattttggcg
cagccactcgcaaccgatatcgttcttgaaccgagcgccggacatggcgctctcgtggca
actttgcctgatgtcagcgcattacatctcaacgaaatcgatccgcgcaggcgtgaaaag
ctggcactgctgtttcccgatgccaccatcacagggatcgatggagccatgctggcttcc
catctcgacgcggctgtgcagccaagcctgatcctcatgaacccgccgttctcccggtca
atgggacgaggagcagacgagttcgcagcggtgcgtcacctgcgcgctgccataacgcgc
ctcaggcaagggggacggatcgtcgcgatcatgccggactggttcacgacgagcgcaaag
cttgcgaaaatctacgaagacacctttgcctcttgcacggtccgcacatccatccggctc
gataaatgctatcacaagcagggcaccagcgtggccgtgcgcttgtacgtgatcgacaag
atcccgggtcagatcaaacctgcagttttggcgcgggagacagttgctgacgtcgcgtct
gcggttccaatcattaaacgcgtgacagcccaacccgactgcgagccgcgcgcggcgccg
ccgaaggcaaaaccgggtgtgctcttcaaagccatgcgggcaacgcccatcacaaagcct
gtcaaagcgagggcagcccaaacccccaagatcgaagcactggcgttcaacacattggac
aagccgcgcgttctcggtgagcaaagcggggtctacatcccgtaccggccaagccgggtc
gacattgttggcgcacgcgagcatccgacgccgctcgtcgaaagcgtggccatgggctcg
atcccggcacctatcccagattatgtcccggcgctgcaggaccgggtccttcaggaaagc
ctgctgtccgaggcccagatcgaaactgtcatctatgccgggaacgcgtggcagcagtat
ctgcctggcctgttcgttcccgctgaagaaggcgttggcctgcaactcgacgagcatggg
cgcgcctaccgcaaaggctatttccttggcgatggcacgggggcagggaagggcaggcag
atcgccgcctgcatccttgatggctggcttgcgggacgccgcaaggccatctggatatcg
aagaacgaaagcctgctcgaagacgcgcgccgcgactggagtgctatcggagggctagcg
gccgacattcagccgctttccaactggaagatcgatcaggcggttccgtttcgcgaaggg
atcctgttcgtcacttacccgacccttcgcagccagcgtcaggacgccacccgcctgaag
cagctgctcgattgggcgggcgaggatttcgacggtgtcatcgccttcgatgagagccac
gagatgggcggggttgcaggaggcgagggcgcccgcggcacgaaaagcggatcgctgcag
ggaatcgccggcgtgctgctgcaaaacaacctgcccgatgcccgggttctttacgcctct
gcgactggggcctcggaggtcaacaaccttgcctatgccgtgcggcttggtctgtgggga
cctggcaccgcgtttgccaacagggaagatttcatcagccagatcagggcagggggcatc
gctgcgatggaactcgtgtcgcgggacctcaaggcactgggcctctatcaggcgcgcgcg
cttagctttgcaggcgtcgaatacgacatcctgaaacatgatctgaccgccgaacagatc
gccgtctacgacacttatgccgacgcctgggcgatcattcatcagaaccttgaggaggcg
ctggagctgaccggtgtcgtcgacgagatcgacggcacaacgctcaacagcggtgcgaaa
gccgcagcgcgaagccggtttgaaagcaccaagcagcggttcttcaaccagctgctgctg
tcgatgaagctgcccacgctgattgctgccatcaatctccatctggaccgcgatgaggtg
gttgtcgtccaactggtttcgaccgccgaaagcatcctcgatcgccgtctcgacagcctc
tcgccagaagagcgcgcggagctcgacctcgacctcagcccgctcgacgccgtgatcgag
tacctcgagcgcgccttccccacgcaacagatgcaggtattcgtcgatgacatcggcacc
cagcgctcggcaccgatgttcgacgaggaaggccgtccagtccacaaccagactgcgatc
gcccgccgcgccgagatgatcgagcacctgtgcgccatgccgccgatcaagcctgccctt
gacgggatcatcgagcactatggaccggagaaggtcgccgaggtgaccggacgcagcaag
cggctcataaaccagagcgacggccagcagcgtctcgagacccgctcgccgcggacgaac
cagtccgagacagaccagttcatggatggcaggaagccgatcctagtcttcagcgacgcg
ggcggcaccgggcgatcgtaccacgccagccttgacgcagcttgccagaagcggcgcatc
cacttcctgcttgagcctggatggcgagccgaccgcgccatccaggggctgggccgaacg
caccggacccatcaagccaacacaccgctgttccggcctgtgaccaccaactgcaagggg
gaactgcggttcaccagcaccattgcgcgcaggctcgacagcttaggggcgctgacgcga
ggccaacgccagactggcggccagaacctctttgaccctgccgacaatctcgaaagcgaa
tatgccaaggcggctctctcgacctggtttgccttgctggcggacggcaagctcaagagc
gcaacgctgatcgatttccagcgccgaagcgggctcaagattgtctctgaagacggcatt
ctcgaagaggaccttccgccgatccaacgctggctcaaccgcatcctcgcgctgccgatc
ggaatgcagaatgcgatcttcgaggagtttttggggttggtcgaagcgcgagtgtccgca
gcgcgccaggccggatcgctcgacgttggcgtcgagaccttgcgggttgaacaggccgag
gttgtcgaagacatagtcctgcggaccgacgggcgaactggcgccacgtcacacttgctg
cagctggctctcaagacgagagcgcggccgatctcgcttgaacgtgttcttgagcgccgc
aactacgctgacggctgcattctgctccacaataccaagagcgggaaagcagctatggcc
gaaccttcgcggcacttcatgaccgagcaaggcgagctgatcaggcgagttatccttcac
cgtcccctgcggcgggagtaccaccacttcgatgaccttgcggaatcggcttgggaagaa
gctccgagccaaaccttcgaaaagctgtggcaaagcgaggttgcggagcttgccgaacgg
ctcaccacagagaccgtgtaccttgcgaccggacttctcctgccgatctggtcgagcctt
cccatcgactatctggaggtccggcggatcgtggacgaggagggcagaagctggctcggc
cgcatggtccacgaactcgatgtggcgaagctgctcgagaaattcgacattgcctccacc
gttgaactgagcccggatacgatcatcagggcgctcagcgaaagccggatcatcccgatc
aagcagccgtttgaggcgaccatcaaaggctcccgcgtggcaggcgagcagcgctacgaa
atcgtcggtgcacctgtcgatcagctgccctggctgaagagcatcggctgcttcaccgag
atcatttccttccggacacgggtattcattccgaaagcaaccgcttcatcgctgatcagc
gctctgcttcgcgtgtga
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