Streptococcus pyogenes MGAS315 (serotype M3): SpyM3_1079
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Entry
SpyM3_1079 CDS
T00089
Symbol
deaD.1
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spg
Streptococcus pyogenes MGAS315 (serotype M3)
Pathway
spg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SpyM3_1079 (deaD.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spg03019
]
SpyM3_1079 (deaD.1)
03009 Ribosome biogenesis [BR:
spg03009
]
SpyM3_1079 (deaD.1)
Enzymes [BR:
spg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SpyM3_1079 (deaD.1)
Messenger RNA biogenesis [BR:
spg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SpyM3_1079 (deaD.1)
Ribosome biogenesis [BR:
spg03009
]
Prokaryotic type
rRNA helicases
SpyM3_1079 (deaD.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
DUF1924
Motif
Other DBs
NCBI-ProteinID:
AAM79686
UniProt:
A0A0H2UVX5
LinkDB
All DBs
Position
complement(1122323..1123942)
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AA seq
539 aa
AA seq
DB search
MKFTEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDKFKGDAVQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDSDRRRQKRDKRDGHDGSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttaacttatcacaagacatccaatcagctgttgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaagcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccgggtcgcttgttagatttgattaagcgcaaggctcttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgaaatgcttaacatgggattc
ttggaagacattgaagctattattagtcgtgtcccagcagaccgtcaaaccttgctcttc
tccgcaacgatgccggcacctattaaacaaatcggggttaaattcatgaaagaccctgaa
catgttcaaattaagaacaaagaattaacaaacgtcaatgttgatcaatactatgttcgt
gtgaaagaacaagaaaaatttgatactatgacccgtctgatggatgttaaccagccagaa
ttatccatcgtttttgggcggactaagcgccgagttgatgaaattacacgtggcttgaaa
cttcgtggtttccgtgccgaaggaatccatggtgatcttgaccaaaataaacgcttacgt
gttatccgtgatttcaaaaacgaccaaattgatattcttgttgccactgatgtagcagcg
cgtggccttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggtcgtacaggtcgtgccggtaaatctggtgagtctatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctctccgtccagcaactgctgaagaggcctttcaagccaagaaaaaagta
gccctcaagaaaattgaacgcgattttgcggatgagactattcgttcaaactttgataaa
ttcaaaggcgatgctgtccaattggctgccgaattcactcctgaagaattagctttatat
attttgagcttaacggttcaagatccagatagcttaccagaagttgaaattgcacgtgaa
aaaccattaccattcaaatatgtgggtggtggtcacggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgtggtgatcgccgtggcggctatcgtggtgaccgtaac
agagatgagcgtgatagtgaccgtcgtcgtcaaaaacgtgataagcgtgatggtcacgat
ggcagtggcaaccgcgatttcaaacgtaaatcaaaacgtaatagtaaagactttttcaat
aaagagaaaaaatcaagtgctaaaaatactggttttgtgattcgtcacaaaggtgaataa
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