Streptococcus pyogenes MGAS315 (serotype M3): SpyM3_1676
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Entry
SpyM3_1676 CDS
T00089
Symbol
pnp
Name
(GenBank) putative polynucleotide phosphorylase alpha chain
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spg
Streptococcus pyogenes MGAS315 (serotype M3)
Pathway
spg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SpyM3_1676 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spg03019
]
SpyM3_1676 (pnp)
03016 Transfer RNA biogenesis [BR:
spg03016
]
SpyM3_1676 (pnp)
Enzymes [BR:
spg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SpyM3_1676 (pnp)
Messenger RNA biogenesis [BR:
spg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SpyM3_1676 (pnp)
Transfer RNA biogenesis [BR:
spg03016
]
Prokaryotic type
tRNA degradation factors
SpyM3_1676 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AAM80283
UniProt:
P0DD12
LinkDB
All DBs
Position
complement(1684825..1686957)
Genome browser
AA seq
710 aa
AA seq
DB search
MSKQTFTTTFAGKPLVVEVGQVAKQANGATVVRYGDSTVLTATVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFNGPIAGVQVGYIDGEFIINPDKEQMEASLLELTVAGS
KEAINMVESGAKELSEDIMLEALLKGHQAIQELIAFQEQIVAVVGKEKAEVELLQVDADL
QADIVAKYNAQLQKAVQVEEKKAREAATEAVKEMVKAEYEERYAEDENLATIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRKIDEIRPLDAVVDFLPKVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLAPEYKKRFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIAGITPQILEEALAQAKKARFEILDVI
EATIAEPRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDDEGNVSI
YSSDQAAIDRTKEIIAGLVREAKVGEVYHAKVIRIEKFGAFVNLFDKTDALVHISEIAWT
RTANVSDVLEVGEDVDVKVIKIDEKGRVDASMKALIPRPPKQEKKEEKHD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacctttacaacaacatttgcagggaaaccccttgttgttgaagttggt
caagtcgctaagcaagccaatggggcaaccgttgttcgttatggcgactcaactgtcctg
accgcaactgtcatgtctaagaaaatggcaacgggtgatttcttccctcttcaagttaat
tacgaagaaaaaatgtatgccgctggtaaattcccaggaggtttcatgaaacgtgaggga
cgcccttcaacagatgcgaccttgacagctcgcttgattgaccgcccgattcgtcccatg
tttgccgaaggtttccgtaacgaagtacaagtgattaacactgtcctttcttatgatgaa
aatgctagcgctccaatggcagcgatgtttggctcatctctggccttgtccatctcagat
attccatttaatggaccgattgcaggtgttcaagttggctatattgatggcgagttcatc
atcaatccagataaagaacaaatggaagcgtcgctcttagaattaaccgttgctggtagc
aaagaagccatcaacatggttgaatctggtgccaaagaattatcagaagacatcatgctt
gaggctcttttaaaaggtcaccaagccattcaagaattaattgccttccaagaacaaatc
gtagcagttgttggtaaagagaaagctgaggttgaactgttacaggttgatgcagactta
caagctgatattgtggctaagtacaatgctcaactgcaaaaagctgttcaagttgaagag
aaaaaagcgcgtgaagcagccacagaagccgttaaagaaatggttaaggctgagtacgaa
gagcgttacgcagaagacgaaaacctagcaaccattatgcgtgacgtggcagaaatcctt
gaacaaatggagcatgctgaagtgcgccgcctcattacagaggacaagattcgtcctgac
ggtcgtaagattgacgaaattcgtccgcttgatgctgtggttgacttcttgccaaaagtc
catggatcaggtctctttacacgtggtcaaactcaggcgctatcagttttgactttggca
ccaatgggagaaactcaaatcattgatggtctggctccagagtacaaaaaacgcttttta
caccactacaatttcccgcaatattcagttggtgaaacgggtcgttacggagctgctggt
cgtcgtgaaattggacacggtgccttaggtgaacgcgctcttgaacaagtcttgccaagc
ttagaagagtttccttatgccattcgtttagttgccgaagttctagaatctaacggttcg
tcttctcaggcttctatctgtgctggtacccttgctctgatggctggtggtgtaccaatc
aaggctcctgtggcagggattgccatgggtctcatttcagacgggacgaattatacagtc
ttgaccgatatccaaggtcttgaagaccactttggagatatggactttaaagtggcagga
actcgtgaagggattacagcccttcaaatggatattaagattgcaggaattacccctcaa
atcctagaagaagctcttgcacaagctaaaaaagctcgctttgaaattcttgatgtgatt
gaagcaactatcgctgaaccacgtcctgagttagccccaactgcaccgaaaattgacacc
atcaagattgacgtagacaaaatcaaagtggttatcggtaaaggtggcgaaaccattgat
aagattattgccgaaacgggtgtcaaaattgatattgatgacgaaggaaatgtctctatc
tactcaagtgaccaagctgccattgaccgcactaaagaaattattgcaggtcttgttcgt
gaagccaaggtaggcgaagtttaccatgccaaggttatccgtatcgagaaatttggtgcc
tttgtcaacctctttgacaaaacagatgcacttgttcacatttctgaaattgcttggact
agaacagctaacgtgtcagatgtccttgaagtgggtgaagacgttgatgttaaggtcatt
aagattgatgagaagggtcgtgtggatgcctcaatgaaagctttgattccacgcccacca
aaacaagagaaaaaagaagaaaaacatgactaa
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