Sphingomonas sp. gentR: V3I01_15650
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Entry
V3I01_15650 CDS
T11876
Name
(GenBank) TonB-dependent receptor
Organism
spge Sphingomonas sp. gentR
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Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
WVW39349
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All DBs
Position
complement(3351166..3354009)
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AA seq
947 aa
AA seq
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MRLWAGLMLASAMPAIAQAQVSTEPAPQAPAPSTASNPAVPATATATPQAQTASLPHTQA
QPEAEEEGEEAEPDVVVTARREPGKVIGDIPPDQQLSPADIRSYGVSSVSDLLTELAPQT
TSGRGGSPVILLNGRRIAGFQEIRDLPTEAIQRVDIFPEEVALKYGYRADQKVVNFVLRP
RFRSLAAEAVGKVPTEGGSATGQGKLDWLQIRRDKRLSIHTDYSETSRLTEAERGIVAPA
SNASLGGNIVTADPGLAALTGTSPSVVGVPGGLTAAPSLAQLAGSPATGTDVTPYRTLQS
AQRQWDANIVYSRNIFDKVSASFNAEVQTTQSNSWNGLPSANLVLPAGNPYSPFGTTATV
SRLTTAYGPLVQNNTGLTAHLGTVFNGDLGRWRWSVTGAYDRAESRVATDTGLDVAGLQA
RLNAGDPTANPYGPLDGLGLAARNFARSTSSSGQVDALLNGRVFALPAGDVQASVKVGGQ
TSDFSSSSTRFGMPQSGDVSRDIVNGQANLDLPIANRNRQILSAIGDLSLNLNVGADHLS
DFGTLTTVGYGANWSPLEGVRVIASWTDQEDAPTAQQLGNPSITTPNVRLFDYVRGTTAT
ITAVTGGNPNLVADNRHVMKLGLTLKPWRDRDINLTANYYRIDTDDPIASFPTPTAAIEA
AFPDRFTRDAAGNLLRVDSRPINFANTERSQLRWGFNVSKPIKSKIQKELEAFRAGTGPN
PFAGLNFPGRRGDGEGPRREGQGGPDSPGAGGPSGPGGPGAGGPGGGPGGGGFRGGGFGG
GRGGGGGRVQFALYHTWTFADRVTVAEGGPVLDLLRGDAIGSSGGTSRHQLEAQAGYSNN
GIGVRLSGNWQSATRVNGGTPANPQALDFGSLATVDLRLFADLGQRLDLLKAHPWLRGTR
VSLSFDNLFNQRQRVTDANGTVPIGYQPGYLDPLGRTVRLSIRKLFF
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcggctttgggcgggtttgatgctggcgagtgcgatgccggcgatcgcacaggcgcag
gtctcgaccgagcctgccccgcaggccccggccccttcgacggcttccaaccccgccgtc
cccgcaaccgcgaccgcgacaccgcaagcgcagacggccagcctgccccatacccaggca
cagcccgaggccgaggaggaaggcgaggaggccgaacccgacgtcgtcgtcaccgcgcga
cgcgaaccgggcaaggtgatcggcgacattccgcccgaccagcaactcagccccgccgat
atccgctcctatggcgtgtcgagtgtctccgacctgctcaccgaactcgcgccgcagacg
accagcgggcgcggcggatcgccggtgatcctgctcaacggtcgccgtatcgcgggcttc
caggaaatccgcgatctgccgaccgaggccatccagcgcgtcgatatcttccccgaggaa
gtcgcgttgaaatacggctatcgcgccgaccagaaggtggtgaacttcgtcctgcgcccg
cgcttccgctcgctggcggccgaggcggtgggcaaggtgccgaccgagggcggctcggcg
acggggcagggcaagctcgactggttgcagatccgccgcgacaagcggttgagcatccac
accgattattccgaaacctcgcgcctgaccgaggcggagcgcggcatcgtcgcacccgcg
tccaatgcgtcgctgggcggcaacatcgtcaccgccgaccctggcctcgccgcgctgacc
ggcaccagccccagcgtggtgggcgtgcccggcggcctgaccgccgcgccgtcgctggcg
cagctcgcgggcagcccggcgaccggcaccgacgtcaccccctatcgcacgctgcaatcg
gcgcagcggcaatgggacgccaacatcgtctattcgcgcaacatcttcgacaaggtgtcc
gcctcattcaatgccgaggtgcagacgacgcagagcaacagctggaacggcctgccctcg
gccaatctggtgctgcctgcgggcaatccctattcgccgttcgggacgaccgcgacggtc
agccggttgaccactgcctatggtccgttggtccagaacaataccgggctgaccgcccat
ctgggcacggtgttcaacggcgatctgggacggtggcgctggtcggtgacgggcgcctat
gaccgggccgaaagccgggtggccaccgataccggactggacgtggcggggttgcaggcc
aggctgaacgcgggcgatccgaccgccaatccttatggaccgctcgacggactgggtctg
gcggcgcgcaatttcgcgcggtcgacgtcttcgtcggggcaggtcgatgcgctgctcaac
ggccgggtcttcgcgctgcccgcgggcgatgtgcaggccagcgtgaaggtgggcgggcag
accagcgatttctccagcagctcgacccggttcggcatgccacaatcgggtgacgtgtcg
cgcgacatcgtcaacggccaggccaatctggacctgccgatcgccaatcgtaaccgccag
atcctgagcgcgatcggcgacctgtcgctgaacctgaatgtcggggcggatcacctgtcg
gacttcggcacgctgaccacggtcggctatggcgccaactggtcgccgctggagggcgtt
cgcgtcatcgcctcctggaccgatcaggaggatgccccgaccgcgcagcagctcggcaac
ccgtcgatcaccacgcccaatgtccgcctgttcgactatgtgcgcggcacgaccgcgacg
atcacggcggtgacgggcggcaatccgaatctggtcgcggacaatcgccatgtcatgaag
ctgggtctgacgctgaagccgtggcgcgaccgcgacatcaacctgaccgccaattattac
cggatcgacaccgacgatccgatcgcgtccttcccgacgccgaccgccgcgatcgaggcg
gcgttccccgaccgtttcacgcgcgatgccgcgggcaacctgctgcgcgtcgattcgcgc
ccgatcaactttgcgaacaccgagcggtcgcagctgcgctggggctttaacgtctccaag
ccgatcaagtcgaagatccagaaggagctggaggcgtttcgcgccggcaccggccccaat
ccctttgccgggctgaactttcccggccgtcgtggcgacggcgaaggtccgcgtcgcgag
gggcagggtggtcccgatagtccgggtgcgggcgggcctagtggtccgggtggtcccggc
gcgggcggacccggtggcgggccgggcggcggcggtttccggggcggcggctttggtggc
ggacgcggcggtggcggcgggcgtgtgcagttcgcgctctatcacacctggacctttgcc
gaccgggtgacggtggcagagggtggcccggtcctcgatctgctgcgcggcgatgcgatc
gggtcgagcggcggcacctcgcggcatcagctggaagcgcaggcgggctattccaacaac
ggcatcggtgtgcgcctgtcgggcaactggcagagcgcgacgcgggtcaatggcggcacc
cccgccaatccgcaggcgctcgatttcggcagcctggcgacggtcgacctgcgcctgttc
gccgatctgggccagcggctggacctgttgaaggcgcatccctggctgcgcgggacgcgg
gtcagcctgtccttcgacaatctgttcaaccagcggcagcgcgtgaccgatgccaatggt
accgtgccgatcggctatcagccgggctatctcgatccgctgggccgaaccgtccgattg
tcgatccgcaagctcttcttctga
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