Streptococcus pyogenes MGAS10270 (serotype M2): MGAS10270_Spy0086
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Entry
MGAS10270_Spy0086 CDS
T00355
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sph
Streptococcus pyogenes MGAS10270 (serotype M2)
Pathway
sph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MGAS10270_Spy0086 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sph03021
]
MGAS10270_Spy0086 (rpoC)
03400 DNA repair and recombination proteins [BR:
sph03400
]
MGAS10270_Spy0086 (rpoC)
Enzymes [BR:
sph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MGAS10270_Spy0086 (rpoC)
Transcription machinery [BR:
sph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MGAS10270_Spy0086 (rpoC)
DNA repair and recombination proteins [BR:
sph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MGAS10270_Spy0086 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ABF33151
UniProt:
Q1JJ22
LinkDB
All DBs
Position
97980..101621
Genome browser
AA seq
1213 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLL
KRVDLAAEIAELKEELKSASGQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAKEYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGI
AVDSMPNKPWKDNQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QDIQEVIDGLDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIDAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGNVVEIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVEVGDE
VNRGAALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAMNEIEVIDHT
EVSAEAVFTAEAE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaggtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
ccagaacgtgaaggactctttgacgaagtcatctttggtccaacaaaagactgggaatgt
gcgtgtggtaagtacaaacgtatccgttataaagggatcgtttgtgaccgctgtggggtt
gaggtaactcgtgctaaagtacgtcgtgaacgtatgggtcacattgagttaaaagctcct
gtatcacatatctggtatttcaaagggattccatctcgtatgggattgactcttgatatg
agtcctcgtgcccttgaagaagtgatctattttgcggcttatgtggtcattgatccaaaa
gatacaccgcttgaaccaaaatcattattaacagaacgtgaataccgtgaaaaactacaa
gagtatggtcatgggtcatttgtcgctaagatgggtgctgaagccattcaagatctcttg
aaacgtgtggacttggcagctgaaatcgctgaattaaaagaagagttgaaatctgcttct
ggtcaaaaacggattaaagcagttcgtcgtttagacgtccttgatgcctttaacaaatct
ggaaataaaccagaatggatggttcttaacatcctgccggttattccaccagatcttcgt
ccgatggttcaattggatggtggtcgttttgcggcatcagacttgaatgacttgtaccgt
cgtgtgattaaccgtaataaccgtttggcacgtttgttagaacttaatgcccctggcatc
attgttcaaaatgaaaaacgaatgcttcaagaagccgttgatgctttgattgataatggt
cgtcgtggtcgtccaatcactggaccaggaagtcgtccattgaaatcattgagccacatg
cttaaaggtaaacaagggcgtttccgtcaaaacttgcttggtaaacgtgtagacttctct
ggacgttccgttatcgctgttggtccaacccttaaaatgtatcaatgtggtgtcccacgt
gaaatggctatcgagctttttaaaccatttgtaatgcgcgaaattgtcgccaaagaatat
gctggtaacgttaaagccgctaaacgtatggttgaacgtggcgacgaacgcatctgggat
atcttagaagaagttatcaaagaacacccagtcttacttaaccgcgcaccgactcttcac
agacttggtattcaggcttttgaacccgttcttattgacggtaaggcacttcgtcttcac
ccacttgtgtgtgaggcctacaatgccgacttcgatggagaccaaatggccattcacgtg
ccactttcagaagaagcacaagctgaagctcgtcttttgatgcttgctgcagagcacatc
ttgaaccctaaagatggtaaaccagttgttactccatctcaggatatggttcttggtaac
tactatcttacgatggaagatgctggtcgcgaaggcgaaggtatgattttcaaggataaa
gacgaagctgtgatggcatatcgtaatggttatgctcatcttcatagtcgtgtgggtatc
gctgttgacagcatgccaaacaaaccttggaaagacaatcaaagacataaaatcatggtg
acaactgttggtaagattttgtttaacgatatcatgccagaggaccttccttacctccaa
gagccaaacaatgccaacttgacagaaggaacacctgataaatacttccttgaacctggt
caagacatccaagaagtgattgatggcttagacatcaatgtgccatttaagaagaaaaac
ctcggtaacatcattgcggaaaccttcaaacgtttccgtacaacagaaacatcagccttc
cttgaccgtttgaaagaccttggttactaccattcaacccttgctggtttgacagtgggt
atcgctgacatcccagttatcgataacaaagcagaaatcattgatgctgctcaccatcgt
gttgaagaaattaacaaagccttccgtcgtggtttgatgacagatgatgaccgttatgtt
gccgttacaacaacatggcgtgaagctaaagaagcccttgaaaaacgtctgattgaaaca
caagatcctaagaacccaatcgttatgatgatggactcaggagctcgtggtaacatctca
aacttctcacagcttgctggtatgcgtggtttgatggctgctcctaacggacgcatcatg
gaacttcctatcttgtcaaacttccgtgaaggtttgagcgttttggaaatgttcttctca
acccacggtgcacgtaaagggatgaccgatacggcccttaaaacagccgactcaggttat
cttactcgtcgtttggttgacgttgcccaagatgttatcattcgtgaggacgattgtggc
actgatcgtggtcttcttatccgtgctattacagatggtaaagaagttaccgaaacgctt
gaagagcgtcttcaaggtcgttacacacgtaaatcagtcaaacaccctgaaactggtgaa
gtcttgattggtgctgaccaattaatcactgaagacatggctcgtaagattgttgatgca
ggtgttgaagaagtgaccattcgttctgtctttacctgtgcgactcgtcatggtgtctgc
cgtcactgttatggtatcaacttggcaactggtgatgctgttgaagtgggtgaagcagtt
ggtactattgctgcccaatctatcggtgagcctggtactcagcttaccatgcgtaccttc
cacacgggtggtgtagcctcaaataccgatatcacccagggtcttcctcgtattcaagag
atctttgaagcacgtaatcctaaaggggaagcggtcattactgaagtgaaagggaatgtc
gtcgagattgaagaagatgcgtcaactcgtaccaagaaagtctacgttcaaggaaaaact
ggcatgggcgaatatgtcgtaccatttacagcacgtatgaaagttgaagttggcgacgaa
gttaatcgcggagctgcccttacagaagggtcaattcaaccgaaacgtctccttgaagtg
cgtgataccttgtcagttgaaacgtaccttcttgcagaagtacaaaaagtttaccgtagc
caaggggtagaaatcggagacaaacacgttgaggtaatggttcgccaaatgcttcgtaaa
gttcgtgtcatggatccaggtgatacagacctccttccaggtacacttatggatatttct
gatttcacagatgctaacaaagatattgttatctctggtggtattcctgcgacatctcgt
cctgttcttatgggtattactaaggcttcccttgaaaccaattccttcttatcagctgca
tccttccaagaaacaactcgtgttcttacagatgctgctatccgtggtaagaaagaccac
ttacttggtcttaaagaaaatgttatcattggtaaaatcattccagctggtactggtatg
gcgcgctaccgtaacattgaaccacaagcgatgaatgagattgaagtgattgatcataca
gaagtctcagcagaagccgtttttacagcagaagcagaataa
DBGET
integrated database retrieval system
