Sphingomonas paeninsulae: D3Y57_01425
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Entry
D3Y57_01425 CDS
T05706
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
KO
K07347
outer membrane usher protein
Organism
spha
Sphingomonas paeninsulae
Pathway
spha02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3Y57_01425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spha02000
]
D3Y57_01425
02044 Secretion system [BR:
spha02044
]
D3Y57_01425
02035 Bacterial motility proteins [BR:
spha02035
]
D3Y57_01425
Transporters [BR:
spha02000
]
Other transporters
Pores ion channels [TC:
1
]
D3Y57_01425
Secretion system [BR:
spha02044
]
Chaperone-usher system
Type 1 pilus assembly protein
D3Y57_01425
Bacterial motility proteins [BR:
spha02035
]
Pilus system
Fimbrial proteins
D3Y57_01425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usher
Motif
Other DBs
NCBI-ProteinID:
AYJ85426
UniProt:
A0A494THW3
LinkDB
All DBs
Position
unnamed1:55292..57496
Genome browser
AA seq
734 aa
AA seq
DB search
MIFLAVTVNGVPKDGQYLLARRHGEFLARPPDLARWGIRAHPTATTAIENDNFVDLATIP
GITLQFDAGRELIAMTVSDELLDLHKISASTARMNPTESALAAFLNYDLSVQYADKAQAS
VFLEAGVSGNWGLLATTMAVGQQAGSGGVTRLDTYFLRDDPDALIRLVVGDTVSDSNEWT
RQIRFGGVRLGTEFGLQPNLITFPTPAFAGRTAIPSNVELLVNNAQRFQTDVAEGPFSIS
QVPLVSGAGEVTLVVRDALGVERRVTSSYYVSSRLLSPGRSAWSFEAGGERVDYGIKDFS
YRNPFMSGSYRSGITDWLTLESRAELSGDVQMAGAGANIVWSPIGEFGIAAAASRGSNGD
GTLYRVFFNRITPRWNIAVSYQHASRTFDQLGIYSDAERITHQLQASAGTSLGRWGNFGV
VYTDLEYADRTRTRLTSANYSIGIGDRGYLSLFALRSAVTGDRIDTTLGAGFTIPFGSRS
SGYIQADSHNALAEIHKTPPTDGGWGYRFTASTGESDRQQAELDWRGNQGEVSVEAARID
GSSGVRMLASGGLLATGDRVYATRRVEDAVGVVDVPDLPDVRIYQENRLVARTDGQGRAI
IPDLRAYENNRLAIAPGDVPIDAQMPDDTLMIVPRYRGAAKAHFAIEQDHAVTIVLQTSD
GALVDAGIVVRLGTGETTFTGYGGEIFVRKARIGMSIEFDTQQGPCRIVLGALPTGDVLP
RIGPLRCGAAASTP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
ctgatcttcctggcggtcacggttaatggtgttcccaaagacggccaatatctattggca
cgacgccatggcgaattcctcgcccgaccgccagatctcgcacggtggggcattcgggcc
catccgacggcaacaacagcgattgaaaatgataattttgtcgatctggccacaattccc
ggcatcactctgcaattcgacgcgggccgcgagctcatcgcaatgacggtttccgacgaa
cttttagacttacacaaaatctctgcatcgactgcgcgcatgaacccaaccgaaagcgct
ctcgccgcgtttctaaattacgatctgtcagtccaatatgccgataaagctcaagcctcg
gtttttctggaagccggcgtatcgggtaattggggcttgctcgctacgacaatggcggtc
ggccagcaggcggggtccggcggcgttacgcggcttgacacctactttctgcgtgacgat
ccggacgcgcttattcgcttggtcgtcggcgacacggtcagcgattcaaacgaatggaca
cgccagattcgctttggcggcgtccggttgggcactgagtttggccttcaaccaaacctc
atcacctttcccacgcccgccttcgctgggcgtaccgcgatcccatcgaatgtcgagctt
ctggtcaataatgcccagcgctttcaaacggacgttgccgaggggccattttcgatcagc
caggtgccgctcgtcagtggtgcgggagaagtgacgctcgtcgtccgcgatgcgcttggt
gtcgagcgtcgggtaacatcatcctattatgtcagctcgcgccttttaagtcccggccgg
agcgcctggtcgttcgaagccggcggcgagcgtgtggattatggcatcaaggacttcagc
tatcgaaaccctttcatgtcaggctcatatcgcagcggaatcaccgactggctaactctc
gaaagccgggctgaactgagtggcgacgtccagatggcgggcgctggagccaacatcgtc
tggtcgccaatcggagagttcgggatcgctgccgcggcttcacgcggcagcaatggcgac
gggacgctctatcgggttttcttcaatcgcatcacaccccgatggaatatcgcagtcagt
tatcagcacgcctcgcgcacgttcgaccaactcggaatttatagcgatgcggaacgtatc
acccaccaactccaggcatccgcgggtacttcgcttggacgatggggcaatttcggtgtc
gtttacaccgatctcgaatatgccgaccgcactcgcacccggctcacctcagccaattac
agcatcgggatcggcgatcggggctatctgagcctgttcgcgctacgcagcgccgtcact
ggggatcggatcgacacgacgttgggcgcaggttttaccattccgttcggatcgcggagc
agcggatatatacaggccgatagccacaatgcgcttgctgaaattcacaagacgccaccc
accgacggcggctggggttatcgcttcacggccagcacaggcgaaagcgatcgtcagcag
gccgaactcgactggcgtggcaatcagggtgaagtcagcgtggaagccgcgcggatcgac
ggaagctcaggggtcaggatgcttgccagcggcggcttactcgcgaccggcgatcgcgtt
tacgccactcgccgggtcgaggatgcggtgggtgtcgtcgatgtaccagacttgccagat
gttcgtatttatcaggaaaaccgccttgttgcacgcaccgacggccaaggccgggcgatc
atccccgatctacgggcctatgaaaacaaccgtctcgcaattgcgccgggggacgtgcca
atcgacgcccaaatgcccgacgatacgctcatgatcgtgccgcgctatcgcggagcagcg
aaagcacattttgcgatcgagcaggatcacgctgtgacgattgtgctacagacgtccgat
ggcgctttagtcgatgcgggtattgttgtacggcttggaaccggcgaaaccacattcacg
ggctatggtggagagatattcgttcgaaaggcgcgcatcggcatgtccatcgagtttgac
acccaacaaggaccatgccgaatagttcttggggcactcccaacaggagacgtgttgcca
cgcattgggcccttgcgatgtggcgctgcggcgagcacaccatga
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