Sphingomonas paeninsulae: D3Y57_01505
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Entry
D3Y57_01505 CDS
T05706
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spha
Sphingomonas paeninsulae
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spha03021
]
D3Y57_01505
Transcription machinery [BR:
spha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3Y57_01505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AYJ84795
UniProt:
A0A494TI01
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All DBs
Position
unnamed1:complement(77599..78165)
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AA seq
188 aa
AA seq
DB search
MSLDLPACSDGELAALTLSGRQAAFGEIMRRHQNPIYRLVRGLVGNAEEALDLTQDCFVS
AFSHLRKYDGDRPMRAWLSRIAINKCRDWRRRQRVRRFFSFGAPAAEVEKVADDGPSAHA
SAAAKIELERLTVAIGALPASLQEVLLLRTVEGLSQAEAATALSISGKAVETRLYRARAR
LTEILIEK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctggatttaccggcgtgttcggacggtgaactagcggcgctgacgctcagcggt
cggcaagcggcgtttggtgaaatcatgcgccgccaccagaacccgatttatcggctggtg
cgcggtcttgtcggcaatgccgaagaggcgctcgatctcactcaggattgtttcgtgtcg
gcctttagccatttgaggaaatatgatggcgaccggcctatgcgtgcatggctttcgcgt
atcgcgatcaacaaatgccgggactggcggcggcgacagagggtgcgacgatttttctca
tttggcgctccggccgccgaagttgaaaaagtggctgacgacggcccttcggcacatgcc
agcgcggccgcgaaaatagagcttgagagactgactgttgcgatcggcgcattgccggca
tcgttgcaagaggttctgttgctccgcactgttgaggggctcagccaggcggaagctgct
accgctctttcgatcagcggcaaggcggtggaaacgcgattatacagggcgcgggcgcgg
cttaccgaaatcctgatcgaaaaatga
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