Sphingomonas paeninsulae: D3Y57_04035
Help
Entry
D3Y57_04035 CDS
T05706
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
spha
Sphingomonas paeninsulae
Pathway
spha02020
Two-component system
spha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3Y57_04035
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D3Y57_04035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spha03000
]
D3Y57_04035
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spha02035
]
D3Y57_04035
Transcription factors [BR:
spha03000
]
Prokaryotic type
Helix-turn-helix
Other families
D3Y57_04035
Bacterial motility proteins [BR:
spha02035
]
Flagellar system
Flagellar assembly proteins
Others
D3Y57_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_50
AAA
nSTAND1
AAA_7
TIP49
Zeta_toxin
APS_kinase
IstB_IS21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AYJ85204
UniProt:
A0A494TD63
LinkDB
All DBs
Position
unnamed1:complement(591941..593086)
Genome browser
AA seq
381 aa
AA seq
DB search
MLTIPVLGRFRKVLSSLFSNNPRTERDRLFGVGRTTIMTISSIKTLDAKVSAQTLLCGES
SRMRAVRSLVTQVAHRNASVLVTGPSGSGKERVAQAIHAESDRSKGPFVAINCGAIPRDL
LESELFGHEKGAFTGAHATRIGRFEEAHGGTLFLDEIGDMPHDMQVKLLRVLEERVIERV
GGRTRIPVNVRIVSATHRDLEAAILDGRFREDLYYRLAVFPVELPPLAERTGDLPILMDH
FLTTLGDRRGSVRFAPDGIARLANHNWPGNLRELRNLVERAVILHPGETIGANEVSRLLS
RTPTTTAVELRSMAITAPAAPTATTSLLGAGIIDLRNVLAEIEGRYINEAIERSGGVIAE
AARILGLRRTTLIEKMRRYAA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccatccccgtattggggcgattccgaaaggttttgtcatccttgttttctaat
aatccacgaaccgaacgagatcgattgttcggggtggggcgaacgacaatcatgaccata
tcaagcatcaagaccttggacgccaaagtatcggcacagactttgctttgtggtgaaagc
agccgaatgcgagcggtccgttcgctcgttactcaggtcgctcatcgcaatgcatcggtg
ctggtcacggggccctcaggtagcggaaaggagcgcgtcgctcaggcaatccatgctgaa
agcgaccgaagcaaaggcccctttgtcgcaatcaattgtggcgccattccgcgcgacctt
cttgaatcggagctttttgggcatgaaaaaggagcgttcaccggcgctcatgccacacgc
atcggccgcttcgaagaggcgcacggcggcacgttgttcctcgatgaaatcggcgacatg
ccgcatgacatgcaggtcaaattgctccgtgtgctcgaggagcgggttatcgaacgcgtc
gggggccgaacgcgcattcctgtcaatgtccggattgtgtcggctacgcatcgcgacctt
gaagcggctatcctcgacggtcgatttcgcgaagatctctattatcgccttgcagtcttt
ccggttgagctgccgccattggccgagcgcaccggcgatctaccgatcctcatggatcac
tttctgacaaccctcggtgaccggcgcggctcggtgcgctttgcaccagacggcatcgcc
cggctggcgaaccacaactggccgggaaatctgcgtgaattgcgcaacctcgtcgagcgc
gcagtcatcctccatcccggcgagacgatcggtgctaacgaggtctcccgattgctgtcg
cggacaccgaccaccactgccgtcgaactacgctcgatggccattacagctccagccgca
ccgactgcgacaacatcgctgcttggtgccgggatcatcgacttgcgcaatgtattggcc
gagatcgaaggtcgttatatcaatgaagccatcgagcgcagcggtggcgtcatcgccgag
gccgcgcgtatcctcggcctccgtcgtacgacactcatcgaaaaaatgcgccgctacgca
gcctaa
DBGET
integrated database retrieval system
