Sphingomonas paeninsulae: D3Y57_06080
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Entry
D3Y57_06080 CDS
T05706
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
spha
Sphingomonas paeninsulae
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spha03029
]
D3Y57_06080 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spha02000
]
D3Y57_06080 (bamA)
Mitochondrial biogenesis [BR:
spha03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
D3Y57_06080 (bamA)
Transporters [BR:
spha02000
]
Other transporters
Pores ion channels [TC:
1
]
D3Y57_06080 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AYJ87791
UniProt:
A0A494TPM2
LinkDB
All DBs
Position
151111..153723
Genome browser
AA seq
870 aa
AA seq
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MLGGAPALAQRNRPTPQPATSLLSPAPPAPAPVTDGGTIKSIAVSGAQRIEPETVRSYVK
LRIGGAYTRESLDQALQDLFATELFADVQIRDENGALTIIVKENPVINRIVFEGNKRIKE
DKLSKELKLAPRQIFTRSKVRADIARIIELYRRQGRFAATVEPKMVMLDQNRVDVVYEVS
EGPKSKVRQINIIGNTKFSDGELRSEMVTKRSSLSRMLSSNTSYDPDKLAYDQGKLRQFY
LTNGYADFRVVSAVSELTPDKRDFIITYVVEEGERYKFGDIDVESDIRDFKATTVKTLLP
MHKGEWYNAKLVEDTVDNVTKTAGLLGYAFAQIDPQFDRQKDTRTMNITFRVADAPRVYV
ERIDVNGNTLTQDKVVRREFRLAEGDAFNSYSVKRSEDRIKSLGFFQEKLEIAQTQGSAP
DRVILQANVEEKSTGELQLSAGYSSLEKFIINASIKQRNFRGKGQELRASVSYSTYSKSV
EVGFTEPYLFDKNIALGGDIFRRDYNSFNYTNNGDRNTTYSQLTTGFQLRTGVPLTEFVS
VAGRFGVSYDQVTLDQNTYYINGQCSPLIAGRYLCDALGNRLTSSIGYSIVYDNLNNGIH
PTKGQRAVFSQDFAGLGGDVHYLRTRIEASKYWDLGAKFIASARMEAGYIKSFDSSVNGA
DPIRLTDRFFLGQPQLRGFDIRGVGPRVVRTPYVTDPVTGLQTKSTDTSTQTDDALGGRA
YYLGRLELEIPLGAGAKELGLRPSIFIDAGAVFGTTKPELQDYMNGDTRLIQPLLSSSGG
KQCIDTATSSTVTPIPTSGACAAGTTLYQNVIPGFSEAYYGDSPSPRLSIGFGVNWNSPF
GPFRIDIAKALLKQPGDQTKLFTFNVGTQF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcggcgctccagcgcttgcgcagcggaatcggcccacgcctcagcctgcgaca
agcctgctgtcgcccgcgccaccagcgcctgcaccggttacagacggcggcacgatcaaa
tcgatcgccgtcagtggtgcccaacgcatcgagccggaaacggttcgatcttatgtgaaa
ctgcggatcggcggcgcgtacactcgcgaatcgcttgatcaggcgttgcaggatcttttt
gcgaccgaactttttgccgacgtccaaattcgcgacgaaaacggtgctctaacgattatc
gttaaagaaaacccggtcattaaccggatcgtgttcgagggtaacaagcgcatcaaggag
gataagctctccaaggaactgaagcttgctccgcgccagatctttacgcggtcgaaggtg
cgtgccgatatcgcgcgcatcatcgaactttatcgacgccagggccggttcgctgccacc
gtcgaaccaaagatggtcatgctcgaccagaatcgcgtcgatgtggtgtatgaagtttcg
gaagggccaaagtccaaggtccggcagatcaacatcatcgggaacactaagttttcggat
ggcgagctccgcagcgagatggtgacgaagcgttcgagtctgtcgcggatgctctcgtcg
aatacgagctacgatcctgacaaacttgcctatgatcaaggcaagctgcgccaattttac
ctgaccaatggttacgccgatttccgggtcgtttcagccgtgtcagaactgacgccagac
aagcgtgatttcatcatcacctatgtcgtggaagagggcgaacgctataaattcggcgat
atcgacgtcgaaagcgacattcgcgatttcaaggcgacaaccgtcaagacgttgctgccg
atgcataaaggcgaatggtataacgccaagcttgtcgaggacacggtcgacaatgtgaca
aaaactgcgggcctgctcggttacgcatttgcgcagatcgatccacaattcgaccggcaa
aaagacacacggacgatgaacatcacgttccgcgttgccgatgcaccgcgcgtttatgtc
gagcgtatcgacgtgaacggcaatacgcttacgcaggacaaagtcgtgcgtcgcgaattc
cgactggcagagggcgacgcattcaacagctattcggtcaagcgttcggaagatcgcatc
aagtcactgggctttttccaggaaaagctggaaatcgcgcaaacacagggttcggcaccc
gatcgcgtcattcttcaggcgaatgtcgaagaaaaatcgacgggtgaacttcagttgtcg
gccggttattccagccttgaaaagttcatcatcaatgcctcgatcaagcagcgtaacttc
cgcggcaagggccaggaactgcgtgcctcggtcagctattcgacttattcgaagtcggtg
gaagttggcttcaccgaaccgtatcttttcgacaagaatatcgcgctgggcggcgatatt
ttccgccgggattacaactcgttcaactacaccaacaacggtgaccgcaacacgacctat
tcacagttgacgacggggttccagcttcgaaccggcgttccgctgaccgagtttgtgtcg
gtcgcaggacggtttggagtcagctacgatcaggttacgctcgatcagaatacatattat
atcaacggccaatgtagcccactcattgccggtcgctatttgtgcgatgcactgggcaac
cgtctgacatcgtcgatcggttacagcatcgtttacgacaatctgaacaacggcatccac
ccgactaagggtcagcgcgctgtcttcagtcaggactttgccggacttggcggtgacgtc
cattatctgcggacaaggatcgaggcgtcgaaatattgggatcttggggctaagttcatt
gcatcggcaaggatggaagccggatatatcaagtctttcgattcgagcgttaacggtgca
gatccaatccgcctgacagatcgtttcttcctcggtcagccgcaacttcgcggtttcgac
attcgtggtgttggtccccgtgtggtgcgaactccatatgtcacggatccagtaaccggc
cttcagacgaaatcgaccgataccagcactcaaaccgacgatgcactgggcggccgcgct
tattatctgggtcggcttgaacttgagattccgctgggagcgggtgcaaaagaactcggg
ttgcggccttcgatattcattgacgcaggcgccgtttttgggacgaccaaacctgagcta
caagactatatgaatggcgacacccgattgatacagccgcttttaagttcaagcggcggc
aagcagtgtatcgatactgcaacatcatcgaccgtgacgcctatccctacctccggtgcc
tgcgctgctggaacaaccttgtatcagaatgttattcccggctttagcgaggcatattat
ggcgactctcccagccctcgtctctcgatcggcttcggcgtcaactggaactcgccattc
ggtcctttccgtatagatattgccaaggctctcttgaaacagccaggcgatcaaaccaaa
ctgttcacattcaacgtaggaacccaattctaa
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