Sphingomonas paeninsulae: D3Y57_06305
Help
Entry
D3Y57_06305 CDS
T05706
Name
(GenBank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03030
DNA replication
spha03430
Mismatch repair
spha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3Y57_06305
03430 Mismatch repair
D3Y57_06305
03440 Homologous recombination
D3Y57_06305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spha03032
]
D3Y57_06305
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_06305
Enzymes [BR:
spha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3Y57_06305
DNA replication proteins [BR:
spha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D3Y57_06305
DNA repair and recombination proteins [BR:
spha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D3Y57_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AYJ85652
UniProt:
A0A494TEF1
LinkDB
All DBs
Position
203839..204816
Genome browser
AA seq
325 aa
AA seq
DB search
MKLYGHDIQIAAFKAAMAGERMHHAWLLAGPRGVGKGSFAQAAALRLLAEASGRPLNLLG
NDKTLEVPEDHPAAHLMSAGSHPDFRHLQRIANDKGNLARNITIDQVRGLRTLFATGTSM
GDRRVILIDSIDDMERGAANAILKSLEEPPETTVFLLVSHAPGRLLPTIRSRCRMLMFAP
LNEAAMTSVLTDHLPDLSVEKIASLLAGANGLPAAALGAAQLDLAAFETTLNQLATTGDP
TNAIRTGLAQSLALKAALPRYEAFLMRAPTFIATRARISTGPALERALVAWGRARTLSAI
AIPQSLVAETVVFEMAGYVASLADW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctacggtcatgatatacaaatagcagcgtttaaagcagccatggcgggtgag
agaatgcaccatgcgtggttgctcgccggaccgcgcggtgtaggaaagggaagttttgcg
caggccgcagcccttcgtttgctcgccgaggcatcgggtcgcccattaaacttgctggga
aacgataaaaccctcgaagtacccgaagaccaccccgctgcgcaccttatgtcggcagga
agccacccggattttcggcacttacagcgcatagctaatgataaaggtaatctggcgcgc
aatatcaccatcgatcaggttcgtggccttcgaacgcttttcgcgactggaacctcaatg
ggcgatcggcgtgtcatcctgatagattcgatcgacgatatggagcgtggtgccgctaat
gctatattgaagagtctcgaagaaccacctgaaacaactgtttttctgctcgtcagtcac
gctccgggacgtttgcttccaacgatacgctcgcggtgccgtatgctgatgttcgcgcca
ttgaacgaggccgcgatgacgtcagttttgaccgatcatttgcccgatctcagcgtcgaa
aagattgcatctctgctcgctggggcaaacggcttgcctgccgcggcgctaggggcggca
caactcgatctggccgcattcgaaaccacgctcaatcaactcgccacgaccggtgaccct
acaaatgcaatccgcactggccttgctcaatcgcttgcgttgaaggcagcacttccgcgc
tacgaagcctttctgatgcgtgcaccgacatttatcgcaacgcgtgcccgaatcagcact
ggtcctgcgctggaacgcgcgctcgttgcctgggggcgggcaaggacactcagtgcaata
gccatcccacaatcgctcgttgccgaaaccgttgttttcgaaatggcagggtatgttgca
agtttggccgactggtga
DBGET
integrated database retrieval system
