Sphingomonas paeninsulae: D3Y57_06970
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Entry
D3Y57_06970 CDS
T05706
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
spha
Sphingomonas paeninsulae
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_06970
DNA repair and recombination proteins [BR:
spha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
D3Y57_06970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
P-loop_SecA
DUF533
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AYJ85759
UniProt:
A0A494T8T5
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All DBs
Position
322478..323875
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AA seq
465 aa
AA seq
DB search
MELRDYQDGMLEEARGHMRAGVRRILLQLPTGGGKTVMAAKMLGGASARAIASQFLVHRR
ELIEQTSDTFRRVDIPHGIIAAGFVENRDRLVQIAGVHTLGNRLDTATPPGMIVCDEAHH
AVAGTWGKILERYGNAFLIGLTATPERLDGRGLKDHFDVIVKGPSVAELIARGFLSPYTY
YAPGKPDLLGVPTRAGDFNRGELGAAMDKPKLIGNVVEHYQKLAAGKQGVVFAASVEHSK
HLAEAFTAAGVRAAHVDGSMDERDRKRIVSAFRAGDIEIMSNVDLFGEGFDVPGLVYCGL
ARPTKSLSLHLQQVGRALRVMQGKEQAIICDHAGNAFVHGMPDDPREWSLEGRHKRAGGG
GGPTDAMVIHQCLTCYRVSPSRLACCPGCGTEFPNRSRTLEQEAGELTALERIAAKAKAT
ADRKAEERECKSLADFEALGRKRGYEPGWARHQWSFRSKFRRRAA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtggaactccgcgattatcaggacggtatgctcgaggaggcgcgtggtcacatgcgcgcc
ggtgttcgacgcatactgctgcagctccctactggtggcggtaaaactgtcatggccgct
aaaatgctgggcggtgcgtccgcgcgcgcgatcgcgtcacagtttctcgttcatcgccgt
gagctaatcgagcagacaagcgataccttccgacgtgtcgatattccgcatggcatcatc
gctgcagggttcgttgagaaccgtgaccggttagtgcagattgccggtgttcacacgctg
ggcaaccgcctcgataccgcgacccctccgggcatgatcgtctgcgacgaggcgcaccat
gcggttgccgggacatggggcaagatcctcgagcgatacggcaacgcgttcctgatcgga
ctgaccgcgacacctgaacgccttgatggacgcggcctcaaggaccacttcgatgtcatc
gtgaagggaccgagcgtcgctgagctgatcgcgcgcgggttcctctccccttatacctat
tacgcgccgggcaagcctgatctgcttggcgttccgactcgggccggtgacttcaaccgt
ggcgagctgggcgcggcgatggataagccgaagctcatcggcaatgtcgtggagcactat
cagaagctggcggctggtaagcagggtgtcgtgttcgctgcttccgttgagcacagcaag
caccttgccgaagcgttcactgcagctggcgtccgcgccgcgcatgtcgatggctcgatg
gacgaacgggaccgcaagcgcatcgtgtcggcgttccgggccggtgacatcgaaatcatg
tcaaacgtggatctgttcggcgaggggttcgacgtgccggggctggtttactgcggcctc
gcgcggccaacgaaatcgctctccctgcatctgcaacaggtgggccgtgcgctccgtgtc
atgcagggcaaagaacaggccatcatctgcgaccatgcgggcaacgcgttcgtacacggt
atgcccgacgatccacgcgaatggtcgctcgagggacgtcataagcgcgcaggtggtggc
ggcggtccaaccgacgctatggtaattcaccagtgtttgacctgctatcgggtgtcgcct
tcacggctggcatgttgcccaggctgcggcactgaatttccaaaccgttcgcgcacgctc
gagcaggaagccggtgagcttaccgcgctcgagcggattgccgccaaggcgaaggctacc
gccgaccggaaagctgaggaacgcgagtgcaagtcactggcggacttcgaggcgctggga
cgcaagcgcggatacgagccgggctgggctcggcaccaatggtcgtttcgatcgaaattt
cggagacgcgcagcatga
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