Sphingomonas paeninsulae: D3Y57_08355
Help
Entry
D3Y57_08355 CDS
T05706
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha00260
Glycine, serine and threonine metabolism
spha00460
Cyanoamino acid metabolism
spha00630
Glyoxylate and dicarboxylate metabolism
spha00670
One carbon pool by folate
spha00680
Methane metabolism
spha01100
Metabolic pathways
spha01110
Biosynthesis of secondary metabolites
spha01120
Microbial metabolism in diverse environments
spha01200
Carbon metabolism
spha01230
Biosynthesis of amino acids
spha01240
Biosynthesis of cofactors
spha04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D3Y57_08355
09102 Energy metabolism
00680 Methane metabolism
D3Y57_08355
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D3Y57_08355
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
D3Y57_08355
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D3Y57_08355
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
D3Y57_08355
Enzymes [BR:
spha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
D3Y57_08355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AYJ85983
UniProt:
A0A494TGC1
LinkDB
All DBs
Position
616994..618307
Genome browser
AA seq
437 aa
AA seq
DB search
MSSKPVSLHDVQPDGFFTRGLAESDPQVFSGITREIDRERHQIELIASENIVSKAVLEAQ
GSVFTNKYAEGYPGKRYYQGCAPSDAVETLAIERAKQLFGCGFANVQPHSGAQANGAVML
ALVKPGDTILGMSLDAGGHLTHGARAAMSGKWFNAIQYGVTEHDHLIDFAQVEALAIEHK
PKLIIAGGSAYPRHIDFARFRAIADTVGAIFMVDMAHFAGLVAGGVHPSPFPHAHIATTT
THKTLRGPRGGMILTNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPDFKLYS
QAVLDNAKALAARLAERGANLVSGGTDTHLALVDLTPLGVTGRDADEALERAAITCNKNG
IPFDPLPPVKTSGIRVGSPAGTTRGFGVKEFRDIADMIADVLEGLRTKGESGDPEVEADV
RTRVRALCERFPIYPEL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaagcccgtatctttgcatgacgttcagcccgacggcttttttacgcgcggt
ctggctgagagcgacccgcaggtattctccggcattacgcgcgagatcgatcgcgaacgt
caccagattgaactgatcgcatccgagaatatcgtgtcgaaagcggtacttgaggctcag
ggttcggtgttcacaaacaagtatgcggaggggtatccgggtaagcgttactatcagggt
tgcgcaccatccgatgccgttgagacgctggcaatcgagcgcgccaagcagttgttcggg
tgcgggtttgccaatgtgcaaccgcattcgggcgcgcaggcgaacggtgcggtgatgctg
gcgctggtcaagccgggcgacaccatcctcggcatgagcctcgatgcaggtggccatctg
acgcacggggcgcgcgctgcgatgtcgggcaaatggttcaacgccatccagtacggcgtg
accgagcatgaccatctgatcgactttgcacaggtcgaggcactggcaatcgagcataaa
cccaagctgattattgccggtggttcggcttatccgcgccacatcgacttcgcgcgcttc
cgcgcgattgcggacacggttggcgcaatcttcatggtcgatatggcgcatttcgccggg
ctggttgcaggtggcgttcacccatcgccgttcccgcacgcacacatcgcgacgacaacg
acgcacaagactttgcgcggcccgcgtggcggcatgatcctgaccaatgacgaagccatt
gcgaagaagatcaattcagctgtgttccccggacttcagggtggcccgctgatgcacgtt
atcgcggcgaaggcagttgcgttcggcgaagcgttgcagcccgatttcaagctgtattcg
caggctgttctggacaatgccaaggcgttggccgcgcgtcttgccgaacggggtgcgaac
cttgtttcaggcgggacggacacgcatctggcgctggtcgacctgaccccgctgggcgtc
accggtcgcgatgccgatgaggcgctggagcgcgcggcgatcacctgcaacaagaacggt
attccgttcgaccctcttccccccgtcaagaccagcggcatccgtgtgggttcgcccgca
ggcacgactcgcgggttcggcgtaaaagagtttcgcgacatcgccgacatgatcgccgac
gttctcgaaggtttgcgcaccaagggcgagagcggcgaccctgaagtcgaagccgacgtc
cgcactcgggtccgcgcgctatgcgaacgcttcccgatctacccggagctttga
DBGET
integrated database retrieval system