Sphingomonas paeninsulae: D3Y57_08425
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Entry
D3Y57_08425 CDS
T05706
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spha
Sphingomonas paeninsulae
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spha02000
]
D3Y57_08425
Transporters [BR:
spha02000
]
Other transporters
Pores ion channels [TC:
1
]
D3Y57_08425
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AYJ85992
UniProt:
A0A494TFE8
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All DBs
Position
627025..628950
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AA seq
641 aa
AA seq
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MQRKNSVIRFKYAVAAIALLPVSAFAEDANTASDSNIVVTATGAAEEADQSGQAITVLDK
ATIDARQYQAVSDLLSTTPGVTVTRNGGIGQPTAVRIRGAEDTQTLVLIDGVRVNDPTSP
GGAFDFGNLLTGNIDHIEVLRGPNSVPWGSQALGGVVNIVTAPIPDALGGSLRAEYGYKN
SKQVVGQLGGKSGIFSASLGGGYFDDDGISAFKGGTERDGYRQYAANGRVGVAFSDTINL
DLRANYADSRVDYDGYQSTFPYSFTDTADYAKTQQIFGYAGLNVALFDGALKNRLAFTIN
DTHRDNFEPAFGSAPSFVARGRVERYEYQGDATITDAVRAVFGLEHENSRFFDGFSTERT
NLESGYLQAILKPIESLTVTGGVRVDDHKTYGTKVTFSANAAWRVGSGTVIRASYGEGFK
APTLYQVYGAYGKPAFDGTQALAPLQPETAKSYDIGVEQSVIDGTLKVGATAFRRDTRNQ
IDFVFCASTSLCSQRPSGYYDNTARTRSQGVEVFVEARPTSHLTFTANYSLIDAKNRLTG
ETLLRRPKHNINASIDWNAWDRVNLGASVQTVSDSNDSDFQTFMPTTLDGYTIATIRASV
PIGDRFEVFGRIENLFDAKYEVVSGYGTFGRNAHVGVRVKI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaagaattccgtgatccgtttcaaatatgccgttgcagccatcgcgctgctc
cctgtttccgcgttcgccgaagatgctaacaccgcgtcggattcgaacatcgtcgtcacc
gcgaccggcgcggcagaagaagccgaccagtccgggcaagccatcaccgtcctcgataaa
gcgacaatcgacgcgcgacagtatcaggcggtctccgaccttctgtccacaacgcccggc
gtaaccgtcacgcggaatggcggcattggtcagccaaccgccgtgcgcatccgtggcgcc
gaagacacacagactttggtccttatcgacggcgttcgcgtcaacgacccgacttcaccg
ggcggggcattcgatttcggcaatctgctgaccggtaacatcgatcatatcgaggtactg
cgcgggccgaactcggttccctggggaagtcaggcattgggcggcgtcgtcaatatcgtg
actgcgcctattcccgacgccctcggcggatcgttgcgcgccgaatatggctataagaac
agcaagcaggttgtcgggcaattgggcggcaaatcaggcatcttttcggcatcgctcggc
ggcggttatttcgatgacgacgggatctctgcattcaagggcgggaccgaaagggacggc
tatcggcaatatgcggcaaacgggcgcgttggcgtcgcgttcagcgataccataaacctg
gacctgcgtgccaactatgcagacagccgggtagactacgacggctatcaatcgactttt
ccgtatagttttaccgacacagcggactatgccaaaacacagcaaatatttggctatgct
ggcctgaacgttgccctgtttgacggcgcgttgaagaaccgtctggcgtttacaatcaac
gatacccaccgcgataatttcgaacctgcctttgggtcagcacccagctttgtcgcgcgc
ggccgggtcgagcgttatgaatatcagggcgatgcgacgataaccgacgccgtgcgcgcg
gtgtttggactcgagcatgaaaattcgcgctttttcgacgggttttcgaccgagcgcacg
aaccttgaaagcggttatctccaggctatcctgaagccgatcgaaagcttgaccgtgacc
ggcggtgtccgcgtggacgaccacaaaacctatggaacgaaggtgacattcagcgccaat
gcggcatggcgggttggcagtggtaccgtgatccgcgccagctatggcgaaggtttcaag
gcgccgactctttatcaggtatacggtgcttatggaaaaccggcgttcgacggaacccag
gctctggcgccattgcagcccgaaactgccaagagctatgacatcggcgtcgaacaatcc
gtaatcgatggcacgctgaaggttggtgccaccgcgtttcgtcgcgatacccgcaatcag
atcgacttcgttttttgcgcaagcacgagcctgtgctcgcaaaggccgtccggctattac
gacaacaccgcccgcacgcggtcacagggggtcgaggtgtttgtggaagcgcgtccgaca
tcgcatttgacgttcacggcaaactacagcctgatcgatgcgaagaaccgcctgactgga
gagacgctgctccgtcgcccgaagcacaatataaacgcatcaatcgactggaatgcgtgg
gaccgggtcaatcttggcgcaagcgtccaaacggtgagcgacagcaacgacagcgatttc
cagacgttcatgccaaccacccttgacggctataccatcgccaccatccgggcatcggta
cccatcggcgaccggttcgaggtgttcggacgaatcgaaaacctgttcgacgctaaatat
gaagtcgtgtcgggttatggcaccttcggccgcaacgctcatgtcggcgtgcgggtgaaa
atctaa
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