Sphingomonas paeninsulae: D3Y57_09915
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Entry
D3Y57_09915 CDS
T05706
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha00521
Streptomycin biosynthesis
spha00523
Polyketide sugar unit biosynthesis
spha00525
Acarbose and validamycin biosynthesis
spha00541
Biosynthesis of various nucleotide sugars
spha01055
Biosynthesis of vancomycin group antibiotics
spha01100
Metabolic pathways
spha01110
Biosynthesis of secondary metabolites
spha01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D3Y57_09915 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D3Y57_09915 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D3Y57_09915 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D3Y57_09915 (rfbB)
00525 Acarbose and validamycin biosynthesis
D3Y57_09915 (rfbB)
Enzymes [BR:
spha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D3Y57_09915 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AYJ86224
UniProt:
A0A494TFS0
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Position
905907..906977
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AA seq
356 aa
AA seq
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MANLIVTGGAGFIGANFVHHWRAVSPDDSIVVLDILTYAGNPANLDGLDGVELVVGDICD
TDLVSTLIADHAVDTIIHFAAESHVDRSITGPDAFVTTNVIGTHSLLKAAKTAWLDKGSG
KPHRFHHVSTDEVYGSLGPDDAAFSETTAYSPNSPYSASKAGSDHLVRAYHHTFGLETTT
SNCSNNYGPFQFPEKLIPLFMLNALSGRPLPIYGDGMNVRDWLHVEDHCQGIERILRKGR
IGETYNVGGGQELPNIQVIEEICRGIDAKFSADPELAKRFPDAPAAQGRQTAELKTYVED
RKGHDRRYAIDERKIRTELNYEPARDFQQGFAETLDWYLNREDWWQPLITKAKLAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgatcgtcaccggcggcgcaggctttatcggggcaaatttcgttcatcac
tggcgggccgtctctcccgatgacagcatcgtcgtgctcgatattctaacctacgccgga
aaccccgcaaatctcgatgggctggacggcgttgaacttgtggtcggggatatctgcgat
accgatctggtcagcacgctgatcgccgatcacgcggtcgacacgatcatccacttcgct
gccgagagccacgtcgatcgttcgatcaccgggccagatgcgttcgtgaccaccaatgtc
atcggaacgcacagcttattgaaagctgccaaaaccgcatggctcgacaaagggtcgggc
aaaccgcaccggttccaccacgtttcgaccgacgaagtttacggatcgctgggaccggac
gatgccgcattcagcgagacgaccgcctattcacccaactcaccctattcggcgtcaaag
gcgggttcggatcatctggtccgcgcttatcaccacacgttcgggctcgaaacgacgaca
agcaattgttcgaataactatgggccgttccagttccccgaaaagctaatcccgttgttc
atgctcaacgcattgtcgggtcgccccctgccgatttacggcgacggcatgaacgtccgc
gactggctgcatgtcgaggatcactgccagggcatcgagcgcatcttgcgcaaaggacgc
atcggcgaaacctataatgtcggcggcggtcaggaactgcccaacattcaggttatcgag
gaaatctgccgcggcatcgatgcgaaattttccgccgaccccgaactggcaaagcgtttt
cccgatgctccggcggcacagggacgacaaaccgccgagctgaaaacctatgtcgaggac
cgcaagggccacgaccgccgctacgcaatcgacgagcgtaaaatccgcaccgaactcaac
tacgaacctgcgcgagactttcagcaggggttcgccgaaacactcgactggtatctcaac
cgcgaggactggtggcagcccctgatcaccaaggctaaactggcggcttaa
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