Sphingomonas paeninsulae: D3Y57_09915
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Entry
D3Y57_09915 CDS
T05706
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha00521
Streptomycin biosynthesis
spha00523
Polyketide sugar unit biosynthesis
spha00525
Acarbose and validamycin biosynthesis
spha00541
O-Antigen nucleotide sugar biosynthesis
spha01055
Biosynthesis of vancomycin group antibiotics
spha01100
Metabolic pathways
spha01110
Biosynthesis of secondary metabolites
spha01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D3Y57_09915 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D3Y57_09915 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D3Y57_09915 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D3Y57_09915 (rfbB)
00525 Acarbose and validamycin biosynthesis
D3Y57_09915 (rfbB)
Enzymes [BR:
spha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D3Y57_09915 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AYJ86224
UniProt:
A0A494TFS0
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Position
905907..906977
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AA seq
356 aa
AA seq
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MANLIVTGGAGFIGANFVHHWRAVSPDDSIVVLDILTYAGNPANLDGLDGVELVVGDICD
TDLVSTLIADHAVDTIIHFAAESHVDRSITGPDAFVTTNVIGTHSLLKAAKTAWLDKGSG
KPHRFHHVSTDEVYGSLGPDDAAFSETTAYSPNSPYSASKAGSDHLVRAYHHTFGLETTT
SNCSNNYGPFQFPEKLIPLFMLNALSGRPLPIYGDGMNVRDWLHVEDHCQGIERILRKGR
IGETYNVGGGQELPNIQVIEEICRGIDAKFSADPELAKRFPDAPAAQGRQTAELKTYVED
RKGHDRRYAIDERKIRTELNYEPARDFQQGFAETLDWYLNREDWWQPLITKAKLAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgatcgtcaccggcggcgcaggctttatcggggcaaatttcgttcatcac
tggcgggccgtctctcccgatgacagcatcgtcgtgctcgatattctaacctacgccgga
aaccccgcaaatctcgatgggctggacggcgttgaacttgtggtcggggatatctgcgat
accgatctggtcagcacgctgatcgccgatcacgcggtcgacacgatcatccacttcgct
gccgagagccacgtcgatcgttcgatcaccgggccagatgcgttcgtgaccaccaatgtc
atcggaacgcacagcttattgaaagctgccaaaaccgcatggctcgacaaagggtcgggc
aaaccgcaccggttccaccacgtttcgaccgacgaagtttacggatcgctgggaccggac
gatgccgcattcagcgagacgaccgcctattcacccaactcaccctattcggcgtcaaag
gcgggttcggatcatctggtccgcgcttatcaccacacgttcgggctcgaaacgacgaca
agcaattgttcgaataactatgggccgttccagttccccgaaaagctaatcccgttgttc
atgctcaacgcattgtcgggtcgccccctgccgatttacggcgacggcatgaacgtccgc
gactggctgcatgtcgaggatcactgccagggcatcgagcgcatcttgcgcaaaggacgc
atcggcgaaacctataatgtcggcggcggtcaggaactgcccaacattcaggttatcgag
gaaatctgccgcggcatcgatgcgaaattttccgccgaccccgaactggcaaagcgtttt
cccgatgctccggcggcacagggacgacaaaccgccgagctgaaaacctatgtcgaggac
cgcaagggccacgaccgccgctacgcaatcgacgagcgtaaaatccgcaccgaactcaac
tacgaacctgcgcgagactttcagcaggggttcgccgaaacactcgactggtatctcaac
cgcgaggactggtggcagcccctgatcaccaaggctaaactggcggcttaa
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