Sphingomonas paeninsulae: D3Y57_11190
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Entry
D3Y57_11190 CDS
T05706
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spha
Sphingomonas paeninsulae
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
D3Y57_11190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spha03019
]
D3Y57_11190
03009 Ribosome biogenesis [BR:
spha03009
]
D3Y57_11190
04131 Membrane trafficking [BR:
spha04131
]
D3Y57_11190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spha04147
]
D3Y57_11190
Messenger RNA biogenesis [BR:
spha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
D3Y57_11190
Ribosome biogenesis [BR:
spha03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
D3Y57_11190
Membrane trafficking [BR:
spha04131
]
SNARE
SNARE associated proteins
Others
D3Y57_11190
Autophagy
Aggrephagy
Other aggrephagy associated proteins
D3Y57_11190
Exosome [BR:
spha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D3Y57_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_33
AAA_22
AAA_2
TIP49
AAA_14
IstB_IS21
nSTAND3
RNA_helicase
NPHP3_N
AAA_18
AAA_7
AAA_28
DUF815
Mg_chelatase
ABC_tran
Sigma54_activat
AAA_24
AAA_17
Zeta_toxin
AAA_3
AAA_30
AAA_11
AAA_19
TsaE
NB-ARC
Parvo_NS1
AAA_lid_PRS2_C
ATPase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AYJ87923
UniProt:
A0A494TLM9
LinkDB
All DBs
Position
1153801..1156095
Genome browser
AA seq
764 aa
AA seq
DB search
MADSEISGTRLQVANARPEDAGRGLARVPRSIMAAMTLAEGDVVEITGKRVTAARAVFPY
SEDEGLEILRLDGFQRANAEVGSGDFVTLRKVESKTAQRVVFAPAQQNLRLHGSGHALKR
SFAGRPLVAGDTVATAGQQQVDRTDLPPQLRQMLAAPAYALQEVRLTVVSTVPKGIVHID
SETEVELLAEYVEPKDSRRADVTYDDIGGMGDTIDQLREMVELPLRYPELFQRLGVDPPK
GVLLHGPPGTGKTRLARAVANESSAEFFLINGPEIMGSAYGESEKKLREVFEAAAKAAPS
IVFIDEIDSIAPKRGQVSGEAEKRLVAQLLTLMDGLEARVNLVVIAATNRPEAIDEALRR
PGRFDREIVIGVPDERGRREILGIHTRGMPLAEGVDLAELSRATYGFVGADLAALTREAA
IEAVRRIMPKLNLEEGTIPPEVLDTLSVTRDDFMAALKRVQPSAMREVMVQVPNVGWDDI
GGLDAAAEKLREGVELPLKNPKAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVSKEAQANF
IAIKSSDLLSKWYGESEQQIARLFARARQVAPCVIFIDELDSLVPARGTSAGEPQVTERV
VNTILAEMDGLEELQSVVVIGATNRPNFVDPALLRPGRFDELIYVGVPDKPGRLHILGIH
TARMPLDKDVDLAALAERTNRFTGADLEDLTRRAGLAALRGSLKAKTVTMANFETALIDT
RASVTPEMEADYARMSDTLKVNAMTPQGIGFITPGMLTPRGPKP
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcgaaatctcaggaacgcggctacaagtcgccaatgcacgccccgaagat
gctgggcgaggccttgcccgcgtcccacgctcgatcatggcagcgatgacgctggccgag
ggcgatgttgttgaaatcactggcaagcgcgtcaccgccgcccgcgccgttttcccctat
agcgaagacgagggtctggagattcttcgcctcgacggtttccagcgtgccaatgccgag
gtcggttcaggcgacttcgtaactctgcgcaaagtcgaatcgaaaactgcgcagcgcgtc
gtctttgccccggctcagcaaaatttgcgcctgcatggttcgggccatgccctgaagcgc
agctttgccggtcgtccactggtcgctggcgacaccgtcgcgaccgccgggcaacagcaa
gtcgatcgcaccgacttgccgccacagcttcgccagatgctcgctgcccctgcctatgcg
cttcaggaagtacgcctgacggtggtttcgactgtaccgaagggtatcgttcacatcgat
tccgaaaccgaagtcgaattgcttgccgaatatgtcgagccaaaggacagccgccgcgcc
gacgttacctatgacgacattggcggcatgggcgacaccatcgaccagttgcgtgaaatg
gtcgaactgccgctccgttatcccgaattgtttcagcgcctcggcgtcgatccaccaaag
ggtgttttgctgcatgggccaccgggaacgggaaagacgcgccttgctcgcgctgttgcc
aatgaaagttcggccgagtttttcctgatcaatggtccggagatcatgggttcggcctat
ggcgagtccgaaaagaagctacgcgaagtgttcgaggcggcggcaaaggctgcgccctca
atcgtctttatcgacgagatcgattcgatcgcacccaaacgcggtcaggtttcgggcgaa
gcggaaaagcgcctggtcgcgcaactgcttaccctgatggatgggctggaagcgcgcgtt
aatctggttgtcattgccgcgaccaaccggcccgaggccatcgacgaagcattacgccgc
cccggtcgtttcgaccgcgaaatcgtgatcggtgtcccggatgagcgtggccgtcgtgaa
atcctcggtatccacacccgtggcatgccgctggccgaaggcgtcgatctcgccgaactg
tcgcgcgcgacttatggtttcgtcggtgccgatctggccgcgttaacgcgtgaggccgca
atcgaagccgtccgccgcatcatgcccaagctgaaccttgaggaaggcacgatcccgccc
gaggtgctcgacacattgtcggtcacgcgcgacgatttcatggccgcgttgaagcgcgtc
cagccgtccgcaatgcgcgaagtcatggttcaggttccgaacgtgggctgggacgatatc
ggtggcctcgacgccgcagccgaaaagctgcgcgaaggtgtcgaactgccgctgaagaac
ccaaaggctttccgccgcctgggcatccgtcccgccaagggctttttgctctatggtccg
cccggaaccggcaagacgctgttggcaaaggccgtgtcgaaagaggctcaggccaatttc
atcgcgatcaaatcctccgacctgttgagcaaatggtatggcgagagcgagcagcagatt
gcccgactttttgcccgcgcccggcaagttgcgccgtgcgtaatttttattgacgaactc
gattcgctggttcctgcacgcggcaccagcgcaggcgagccgcaggtgacggagcgtgtc
gtcaacacgatcctcgccgaaatggacggactggaggaattgcagtcagtcgtcgtgatc
ggtgccaccaaccgccccaatttcgtcgatcctgcgttgttgcgaccggggcgttttgac
gaactgatctatgtgggcgttccggacaagccgggccggctccacattcttggcatccac
acagccaggatgccgctcgacaaggacgtcgatctggcggcgctggcggagcggacgaat
cggttcacaggtgccgatctggaggatctgacccgtcgcgcagggcttgccgctctgcgt
ggctcgctcaaagcaaagacggtgacgatggccaatttcgaaacggcgctgatcgatacg
cgcgcgtcggttacgcctgaaatggaggccgattacgcgcggatgtcggacacgctgaaa
gtcaatgcgatgacgccgcagggcatcggatttataacgccggggatgctgactccgcga
ggtccgaaaccctga
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