KEGG   Sphingomonas paeninsulae: D3Y57_11705
Entry
D3Y57_11705       CDS       T05706                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
spha  Sphingomonas paeninsulae
Brite
KEGG Orthology (KO) [BR:spha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spha03400]
    D3Y57_11705
Enzymes [BR:spha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D3Y57_11705
    5.6.2.6  RNA 3'-5' helicase
     D3Y57_11705
DNA repair and recombination proteins [BR:spha03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D3Y57_11705
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AYJ87936
UniProt: A0A494TQ67
LinkDB
Position
1250793..1253210
AA seq 805 aa
MISDSQLPQVLSDWFAAKGWAPRRHQLEMLTAARAGRNALLVAPTGSGKTLAGFMPTLVE
LIEAPTDGLHTLYISPLKALAVDVQRNLLTPIAEMDLDIRVETRTGDTPSDRKKRQRERP
PQVLLTTPESLSLLLSYPESTNLFAGLKTVVIDEVHAFATGKRGDLLSLGLSRLQTIAPN
LRRVALSATVADADGYRAWLAPNGDIDSVTAVQGDPGAEPDIAILLPEGRVPWAGHSGRY
AAPQVMAEIETHNTTLVFCNTRALAELIFQDLWKANDQQLPIGIHHGSLDIEARRKVEAA
MADGRLRGLVATASLDLGVDWGNVDCVVQMGAPKGSSRLLQRIGRANHRLDEPSEAVIVP
GNRFEYLEAQAALDAVEEGELDEDLFRPGALDVLAQHIMACACAAPFDEDRMLAEIQSAL
PYSALDHKTFARVLDFIATGGYALRAYDKFRRLTRNADGLWRVAHPRFVTQHRMNAGIIV
EATMLTVRFRNGRRLGRVEEGFAATLTTGDTFFFSGLSLEVERIETEELIVRASSRPARI
PSYGGARLALSTHLARRVRGFLDDESQWARFPSDVREWLEMQMRRSVLPAPGQLLIETFP
HQGRHYMVAYPFEGWNAHQSLGMLLTKRMENLGLKPIGFVANDYALATFSLEPVVDPRPL
FSADILENEFVDWVQSSHLLKRAFREVAVIGGLVERQHPGKRKTGRQVTFSTDLIYDVLR
RYDPDHLLLKAAWADARARMTDVGRLGALLDRAADSILHIDLPRVTPLAVPVLVMIGREH
VPQGSADDELLIEAETLAAEAMHAD
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgataagtgattcccagctaccacaggtgcttagcgactggtttgccgcgaaaggctgg
gcaccacgcaggcaccagcttgaaatgctgacggcagcgcgggctgggcgtaatgcgctc
cttgttgcgcccacgggttcgggcaaaacgctggcagggttcatgccgactttggtcgaa
ctgatcgaagcgcccacggacggcctgcacacgctctatatatcaccgctgaaagcgctc
gccgtcgatgtgcagcgcaatctgttgactccaattgccgaaatggacctcgatatccgg
gtcgaaacgcggactggtgacaccccatcggatcgcaagaagcgccagcgcgaacggccg
ccacaagttctgctgacgacacccgagagccttagcctgctgctgagctatcctgagagc
accaacctgtttgcaggactaaagaccgtcgtcatcgacgaagttcacgctttcgccacc
gggaagcgtggcgaccttttgtcgctcggcctgtcacgcttgcagactattgccccaaac
ctccgccgcgttgcgctgtccgcaaccgtggccgacgccgacggttatcgcgcatggctt
gcccccaatggagacatcgacagcgtgaccgccgttcagggtgatccgggggccgaaccc
gacatcgcaatcctgctccccgaaggccgcgttccgtgggcgggccattcgggacgatat
gccgcgccgcaagtgatggccgaaatcgaaacgcacaatacgactctcgtattctgcaac
acccgcgctctggccgaactcatctttcaggatttgtggaaggccaacgatcagcaactg
cccatcggcatccaccacggcagcctcgatatagaagcccgtcgcaaggtcgaagcggcg
atggccgacggcagattacgtggccttgtcgccacggccagcctcgacctcggcgtcgac
tggggcaatgtcgattgcgtcgtccagatgggtgcgccgaaggggtcgtcacggctgcta
caacggatcggtcgcgccaaccaccggctcgatgagccatccgaagcggtcatagtaccc
ggcaatcgcttcgaatatctggaagctcaggcggcactcgacgcggttgaggagggcgaa
ctcgacgaagacctgttccgccccggcgcactcgacgttctggctcaacacatcatggcc
tgcgcctgcgccgcgcccttcgacgaagacaggatgcttgccgaaattcagtcggcgctc
ccctacagtgcgctcgaccacaaaacctttgcccgcgttctcgatttcatcgcgaccggt
ggttacgccctgcgcgcctatgacaaattccgccgtctgacccgcaatgcagacgggttg
tggcgcgtcgcccacccgcgtttcgtcacgcagcaccggatgaatgcgggcataatcgtc
gaagcaacgatgctgacggtccggttcaggaacgggcgcaggctgggccgtgtggaggaa
ggtttcgccgccacgctgacgaccggcgacacgttctttttttccggcctcagcctcgaa
gtcgaacgaatcgaaaccgaggaactgatcgttcgcgcatcttcccgccccgcacgcatc
cccagttacggcggcgcacgcctcgcgctttccacacatctcgcaaggcgggttcgcggg
ttcctcgatgacgaaagccagtgggcgcgctttcccagtgatgtccgtgaatggctagag
atgcagatgcggcgctcggtcctcccggcacccggtcagctattgatcgaaacattcccg
caccagggcaggcactatatggtcgcctatccattcgagggctggaacgcgcatcagtcg
ctcggcatgttgctgaccaaacgcatggaaaaccttgggctgaagccgatcgggttcgtt
gccaatgattacgcgctcgccaccttctcgctcgaaccggtcgtcgatccccgcccgctg
ttttccgccgacatcctcgaaaacgaattcgtcgactgggtgcagagttcacacctgctg
aagcgtgcgtttcgggaagttgcagtcatcggcggccttgtcgaacgccagcatcccggc
aagcgcaagaccgggcgtcaggtcactttttcgaccgacctgatctatgacgtcctgcgc
cgctacgaccccgatcacctgctactgaaggcagcatgggccgacgcccgcgcgcgcatg
accgatgtcggcaggctgggtgccctgctcgatcgggcggcggacagcatcctccatatc
gacctgccacgcgttacgccgcttgcggtgccggttctggtgatgatcggccgcgagcat
gttccgcagggttcggccgacgacgagttgttgatcgaggcagaaactctcgccgcagag
gccatgcacgcagactag

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