Sphingomonas paeninsulae: D3Y57_12145
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Entry
D3Y57_12145 CDS
T05706
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03030
DNA replication
spha03410
Base excision repair
spha03420
Nucleotide excision repair
spha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3Y57_12145 (polA)
03410 Base excision repair
D3Y57_12145 (polA)
03420 Nucleotide excision repair
D3Y57_12145 (polA)
03440 Homologous recombination
D3Y57_12145 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spha03032
]
D3Y57_12145 (polA)
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_12145 (polA)
Enzymes [BR:
spha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3Y57_12145 (polA)
DNA replication proteins [BR:
spha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D3Y57_12145 (polA)
DNA repair and recombination proteins [BR:
spha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D3Y57_12145 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3Y57_12145 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
DprA_N
Motif
Other DBs
NCBI-ProteinID:
AYJ86582
UniProt:
A0A494TGY9
LinkDB
All DBs
Position
1343472..1346237
Genome browser
AA seq
921 aa
AA seq
DB search
MSTPTPHLYLVDGSGYIFRAYHRLPPLTNIRGEPVGAVYGYTTMLWKLAEQLNREDGPTH
MAVILDASSKTFRNDMYDKYKAHRPPAPEDLVPQFPMIRDATRAFSIPCIETVGLEADDI
IACYAKAALAAGWAVTVVSADKDLMQLIEPGLDLLDTMNNRRIGPDYVIEKFGVAPELLG
DVLALMGDSADNIPGVPGVGPKTASKLIIEHGGLEAVLAAAPTMKLGKLRDNLIDHADNA
RLSRELVRLVCDRELPEPLEDLLLKGIPDAPLREFLEHHGFRSLLTKLNASAAGGPPATE
TVATPQPVDDTPFDLDAYECVTTVEKLDQWIEVATLSGFVAIDTETDGLDATQAKLIGFS
LCVAPGLACYVPLAHGGTDLLSEKPPQIPMAVALDRLRPLMADPSVLKIAHNLKYDMTIL
ARHDVVVAPFDDTLVISFALDAGRQFNHSMDELALQHLGHKCIAFTDVCGKGKAQLCFDQ
VPLRDATRYAAEDADVTFRLWKRLKPRLSREEATTVYERVDRPLVPVIAAMEREGVKVDA
EQLRALSSEFAYQMAALETEIHELAGHKFAVGSPKQLGEVLFEKLDLKGGRKGKAGAHST
DAAELERLAGQGVPIARKVLDWRQIAKLKSTYTDALQQQVNPETGRVHTSYSLSGAQTGR
LSSNDPNLQNIPIRTENGRRIREAFIAETGNVLLSADYSQIELRLAAHMADVPALKNAFA
NGDDIHSLTAMELFGEVNRDTRGRAKTINFSILYGISRWGLGGRLGITADEAQAMIDRYF
ERFPGINRYIAETLETTRERGFTTTLFGRKTHFTRIKSSNQAERQGSERAAINAPIQGTS
ADIIKRAMVRMLPALAKAGLPNVRMLLQVHDELVFELPEADVEAASIVIHDVMANAAAPL
VELSIPLGVEIGTGKSWGAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccaccccacatctctacctcgtcgatggctccggctatattttccgtgcc
tatcatcgcctgccaccgctcacgaacattcgtggcgaaccggtgggtgcggtttatggc
tatacgacgatgctgtggaagctcgccgaacagcttaaccgtgaggacgggccgacgcac
atggccgtcattctcgatgcgtcatccaagacgtttcggaacgacatgtacgataagtac
aaggcgcaccggcctccggcccccgaagatttggtgccgcaattcccaatgatccgcgat
gcgacgcgcgcattctcgatcccctgtatcgagaccgtgggactcgaagcagacgacatc
atcgcctgctatgcgaaggccgcgctggcggcgggttgggcggttacagtcgtttcggcc
gacaaggatctgatgcagttgatcgagccgggtctcgacctgctcgacacgatgaacaat
cggcggatcgggccggattatgtaatcgaaaaattcggtgtcgctcctgaattgctaggc
gatgtcctcgcgttgatgggcgatagcgccgacaatatccccggcgtacccggcgtcggt
ccgaaaactgcgtccaagctgattatcgaacatggcggacttgaagctgtgctggccgca
gcgcccacgatgaagctcggtaagctgcgcgataatttgatcgaccatgccgacaacgcc
cgattgtcgcgcgaactggtgcggctggtatgtgatcgcgaacttcccgaaccgcttgag
gatttgctactcaagggcattcccgacgcaccactccgcgaatttcttgagcatcacggg
tttaggtcgctgctgacgaagttgaatgcgagcgctgcgggcggaccgccagcaacagag
actgtggcgacaccacagcccgtcgatgatacgccattcgatctcgatgcgtacgaatgt
gtgacgaccgttgaaaaactcgaccagtggatcgaagtcgccacgctttctggctttgtc
gcgatcgacaccgagaccgacgggctggatgcgacgcaggccaagctaatcggcttcagc
ctgtgcgttgcgcccggcctcgcctgctatgtcccgttggcacatggcggcaccgacctg
ctttctgaaaagccaccgcagattccgatggcggtcgcgctggatcgattgcgtccgttg
atggcagaccccagcgtgctgaagatcgcgcataatctgaaatacgatatgacgatcctt
gcgcgccatgatgtcgtggtcgcgccattcgacgacacgctggtaatcagctttgcgctg
gatgccggtcgtcagttcaatcacagcatggacgaactcgcgctccagcacctcggccac
aagtgcatcgcgttcaccgacgtctgcggaaaaggcaaagcacaactctgtttcgatcaa
gtgccgttacgcgatgcgacgcgatacgcagccgaagacgcggacgttaccttccgtttg
tggaagcgcctgaaaccgcgcctgtcgcgcgaagaggcaacaactgtctatgagcgtgtc
gatcgtccccttgtcccggtaattgcggcaatggaacgtgaaggcgtcaaggtcgatgcc
gaacaattgcgcgcgctatcctctgaattcgcctatcagatggccgctctcgaaaccgaa
atccacgaactggccggacataagtttgcggtcggcagcccaaaacaactcggtgaggtt
ttgttcgaaaaactcgacctgaaaggcggtcgcaagggcaaagcgggtgcgcattcaacc
gatgccgccgaactagagcgcctcgccggacagggcgttccgatcgcacgcaaagttctc
gactggcgccagattgccaagctcaaatcgacttacaccgacgcgttacagcaacaagtc
aatccagagactgggcgcgttcacaccagttattcgttgagtggcgcacagaccgggcgg
ctttcttccaacgatccaaatctacagaacattccgattcgaacggaaaatggccggcgc
atccgagaagcgttcattgccgagacaggcaacgtcctgctcagtgccgattacagccag
atcgaattgcgactggccgcgcatatggcggacgtcccagcattgaaaaacgcattcgcc
aatggtgatgacattcacagcctgaccgcgatggaattattcggagaggtaaaccgcgac
actcgtggccgtgcaaagacgatcaacttctcgatcctttacggcatttcacgatggggt
cttggcgggcgacttgggatcacggcggacgaagcgcaggccatgatcgaccgctatttc
gaacgctttcccggcattaaccgctacatcgccgaaacgctggaaaccacacgcgaacgc
ggattcacgacgacattattcggtcgcaaaacgcattttacgcggatcaaatcatcgaac
caggccgaacggcaaggcagcgagcgcgccgcgatcaatgcgccgatccagggaaccagt
gccgacattattaaacgggcaatggttcggatgttgccagctctcgcgaaagcaggattg
ccaaacgtgcgaatgctgctccaggttcatgatgaactcgtgttcgaattgcctgaagca
gacgtcgaggccgcgagcatcgtaattcacgatgtcatggcaaatgcagccgcgccgctg
gtcgaactttcgataccgctgggcgttgaaatcggcacgggaaaaagctggggcgcggcg
cactga
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