Sphingomonas paeninsulae: D3Y57_12365
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Entry
D3Y57_12365 CDS
T05706
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03030
DNA replication
spha03430
Mismatch repair
spha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3Y57_12365
03430 Mismatch repair
D3Y57_12365
03440 Homologous recombination
D3Y57_12365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spha03032
]
D3Y57_12365
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_12365
Enzymes [BR:
spha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3Y57_12365
DNA replication proteins [BR:
spha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D3Y57_12365
DNA repair and recombination proteins [BR:
spha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D3Y57_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AYJ86616
UniProt:
A0A494TLA8
LinkDB
All DBs
Position
1389056..1389799
Genome browser
AA seq
247 aa
AA seq
DB search
MREIVFDTETTGLDHRQGDRVVEIGCVELINRVETGRTYHAYFNPGMAMPSIAEQIHGLS
DAFLSDKPEFHETVEDLLDFLDDSPLIAHNAMFDWGFLNHELGECGRMHIPLSRIIDTLA
MSKTRHPGAKHSLDALCNRYGVDRSQRLKHGALLDAQLLAQIYVELTGGRQIGLEIGLDA
KPMAPAPIQQAVPAALNGRRPRGHEISTEERIRHRLFVARLKEPLWAQGDGWHEPTVSRV
DARADTA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaattgtttttgataccgaaactacggggcttgatcatcgacagggtgatcgc
gttgttgagattggctgcgtcgaactgatcaatcgcgttgaaaccggccgaacctatcat
gcctatttcaaccctggcatggcgatgccgagcattgccgaacagattcacggtctcagt
gatgcttttttgtcggacaagccagagtttcacgaaaccgttgaagatctgctcgacttt
ttggacgacagcccgctcatcgctcacaatgcgatgttcgattggggatttctcaatcac
gagcttggcgaatgtgggcggatgcatattccgctgtctcggattatcgatacgctggcg
atgtcgaaaacccggcatccgggtgccaaacacagtctcgatgcactctgtaaccgttat
ggcgtggatcgcagccagcgcctgaaacatggcgcattgcttgatgcccaattgctggca
cagatttatgtcgaactgacgggcgggcgtcagatcggactggaaatcggtctggatgca
aaaccaatggcaccagcgccaatacagcaggccgtcccggctgcgctgaacgggcgccga
ccgcgcggccatgaaatttcaaccgaagaacgcatccgtcaccgcctttttgttgctcgc
ctgaaggaaccgctctgggcgcagggcgatgggtggcacgaaccgacagtctcacgcgtt
gatgcgagagccgacacggcatag
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