Sphingomonas paeninsulae: D3Y57_13370
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Entry
D3Y57_13370 CDS
T05706
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3Y57_13370 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_13370 (ruvB)
Enzymes [BR:
spha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3Y57_13370 (ruvB)
DNA repair and recombination proteins [BR:
spha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3Y57_13370 (ruvB)
RecFOR pathway proteins
D3Y57_13370 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
AAA_22
Sigma54_activat
AAA_2
AAA_18
nSTAND3
Bac_DnaA
AAA_17
AAA_14
Rad17
TsaE
RNA_helicase
NTPase_1
AAA_28
AAA_33
AAA_24
NB-ARC
ABC_tran
NACHT
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AYJ86770
UniProt:
A0A494TC86
LinkDB
All DBs
Position
1599671..1600696
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AA seq
341 aa
AA seq
DB search
MDDTDSILTPARRPEDVDAALRPKTLDEFVGQKAARENLRIFIAAAKSRGDALDHVLFFG
PPGLGKTTLAQIIARELGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLAPAV
EEILYPAMEDRCLDLIIGEGPSARSVRIDLPKFTLVGATTRQGLLTQPLRDRFGIPVRLH
FYTVPELEKVVTRAAMLLDLGIAPDGAAEVAKRSRGTPRIAGRLLRRVRDFANVAGDAIV
TAKIADAALTRLEVDNLGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEEVIE
PYLIQLGLVARTARGRCLNALGWKHLGLNPPPGAQDGLFDG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgataccgacagcatcctgacccccgcccgccgtcccgaagacgtggacgccgct
ctgcgcccgaaaacccttgacgagttcgtcgggcaaaaggccgcgcgcgaaaacctgcgc
atctttatcgcagccgcaaaatctcgcggagacgccctcgaccacgtcctgtttttcggc
cctcccggcctcggtaaaaccacgttggcgcaaatcatcgctcgcgaactcggtgtcggg
tttcgtgcgacgtccggtccggtcattgccaaatcgggcgacctcgccgcgttgctgacc
aacctcgaggacggcgatgtcctgttcatcgacgagatccatcgtctcgctcccgcagta
gaggaaatcctctatcccgcgatggaggatcgctgcctcgacctcatcatcggcgaaggt
ccatcggcgcgttcggtccgcatcgaccttcccaaattcactcttgtcggcgcaaccacg
cggcagggtttgctgactcagcccctgcgcgaccgctttggcatccccgtccgtttgcat
ttctataccgtccccgaactggaaaaggtcgtcacgcgcgccgccatgctgctcgacctc
ggcatcgcccctgacggtgccgctgaagtcgccaaacggtcgcgcggcacgccccgcatc
gccggtcgcctgctccgtcgtgtccgggattttgcgaatgttgctggcgacgcgattgtc
actgcaaagatcgcagatgccgcactcacccggctggaggtcgataacctcggcctcgac
gcgatggaccgtcgctacctgacgatgatcgcagacatttatcgcggcggccccgtcggc
gtcgaaacgcttgccgccggcctcagcgaaccacgcgatacgatagaggaagtcatcgag
ccgtatttaatccagctcggccttgtcgcccgcacagcgcgcggtcgctgtctgaatgca
ctgggctggaaacatctgggcctcaatccgccacccggcgcgcaagacgggctgttcgac
ggataa
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