Sphingomonas paeninsulae: D3Y57_14570
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Entry
D3Y57_14570 CDS
T05706
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3Y57_14570 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spha03019
]
D3Y57_14570 (pnp)
03016 Transfer RNA biogenesis [BR:
spha03016
]
D3Y57_14570 (pnp)
Enzymes [BR:
spha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D3Y57_14570 (pnp)
Messenger RNA biogenesis [BR:
spha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D3Y57_14570 (pnp)
Transfer RNA biogenesis [BR:
spha03016
]
Prokaryotic type
tRNA degradation factors
D3Y57_14570 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AYJ86934
UniProt:
A0A494THJ5
LinkDB
All DBs
Position
complement(1859799..1862222)
Genome browser
AA seq
807 aa
AA seq
DB search
MFNMKTVEIEWGGQTLKLETGRVARQADGAVMATLGETVVLCAVTAARSVKEGQDFFPLT
VHYQEKFSSAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINVICQVMSY
DGVNEPDVLAMVAASAALTLSGVPFMGPIAAARVGYVEGEYILNPTDEQVAAGDLDLVVA
GTHDAVMMVESEAKELSEEVMLEAVMFAHRGIQKVIGAIVDLAEQAAKEPWAMAPQADLS
AAKTKLKKLIGKDITAAYKLTDKSARSSALNEARAKAKAAFSDATPQDQMAANKLVKKLE
AEIVRTAILKDGQRIDGRTTTQIRPIEAIVGFLPRTHGSALFTRGETQSICTTTLGTKDA
EQMIDGLGGLSYSNFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKDEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKDFAVISDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITEEIMRQALKQAAEGRTHILGEMAKAL
DSTRTELSAHAPRIETLQIDKAKIREVIGTGGKVIREIVATTGAKVDIDDEGLIKISSSD
VAQIEAARQWILGITQEAEVGKVYDGKVVNMVDFGAFVNFMGGKDGLVHVSEIRNERTEK
VTDVLSEGQAVKVKVLEIDPRGKVRLSMRVVDQETGAELEDTRPPREERPRGDRPERSDR
GPRRDGDGGRGPRRDGGGGDRGPRREGGPRSDGGDRAPRAEGDRAPRAEGGDRAPRGEGG
YGGGRAKQDDDNGPAPEFAPAFLTRED
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacatgaaaacagtagaaatcgagtggggcggacagaccctcaagctcgagacc
ggtcgcgttgcgcggcaggccgatggcgccgtgatggcgacgctcggtgaaacggttgtg
ctttgtgcggttacggctgcgcgttcggtgaaagaaggccaggacttctttccgctgacc
gttcactatcaggaaaaattctcgtcggcgggtcgtattcccggcggcttcttcaagcgt
gagcgcggcgcgaccgagaaggaaacgcttgtttcccgcctcatcgaccgtccgatccgc
ccgttgtttccagaaggtttctacaacgaaatcaacgtgatctgtcaggtcatgtcttat
gacggcgtcaacgagccggacgtattggcgatggttgcggcttctgctgcactgacgctg
tcgggtgtgccattcatgggtccgatcgccgctgcgcgcgtcggctatgtcgagggtgag
tacatcctgaacccaaccgacgagcaggttgccgctggcgatctggatctggtagttgcc
ggtacgcacgatgcggtcatgatggttgagtcggaagccaaggagctttcggaagaagtc
atgctcgaagctgtgatgtttgcgcatcgcggcatccagaaggtcatcggcgcaatcgtc
gatctggctgaacaagccgccaaggagccttgggcaatggcaccgcaggccgatctttcg
gctgcgaagaccaagctgaagaagttgatcggcaaggacatcacggccgcttacaagctg
accgacaagtcggcacgttcgtcggcgctgaacgaagcccgcgccaaggcgaaggcagcg
ttctccgatgccacgccgcaggatcagatggccgcaaacaagctcgtcaaaaagctggaa
gccgaaatcgtccgcaccgccatcctgaaggatggtcagcgcattgacggtcgcacgacc
acgcagattcgtccgatcgaagcgatcgtgggcttcctgccccgcacgcacggttcggca
ctgttcacgcgtggcgaaacccagtcgatctgcacgaccactctcggcaccaaggacgcc
gagcagatgatcgacggtctgggtggcctgagctattcgaacttcatgctgcactataac
ttccctccctattcggttggtgaagtcggtcgtttcggcgcccccggtcgtcgcgaaatc
ggccacggtaagctcgcatggcgcgcgctgcacccagtgctgccgtcgaaggacgagttt
ccgtacacgatccgcgttctgtccgacatcacggagagcaacggttcgtcgtcgatggca
acagtctgcggcggttcgctgtcgatgatggatgccggtgtgccattgaagcgcccggtt
tcgggcatcgcaatgggcctgatcctcgaaggcaaggactttgctgtcatcagcgatatc
ctcggcgacgaagatcatctcggcgacatggatttcaaggttgcaggcacgtccgagggc
atcaccacgatgcagatggacatcaagatcgccggcatcaccgaagagatcatgcgtcag
gcactgaagcaggcggccgaaggtcgcacgcacatccttggtgaaatggctaaggcactc
gacagcacgcgcaccgagctttcggctcatgcgccacgcatcgaaacgttgcagatcgac
aaggcgaaaatccgcgaagtcatcggcacgggcggcaaggtcattcgcgaaatcgtcgca
acgaccggtgccaaggtcgacatcgacgacgagggtttgatcaagatcagctcgtccgac
gtggcgcagatcgaagctgctcgtcagtggattctgggcatcacgcaggaagcggaagtc
ggcaaggtttatgacggtaaggtcgtaaacatggtcgatttcggcgcgttcgtgaacttc
atgggtggcaaggacggcctcgtccacgtttcggaaatccgtaacgaacgcaccgagaag
gtcacagacgttctgagcgaaggtcaggccgtaaaggtcaaggttctcgaaatcgatcca
cgcggcaaggttcgcctgtcgatgcgggttgtcgatcaggaaaccggcgccgaattggaa
gatacccgtccgccccgcgaggagcgtccacgcggcgatcgtccagagcgttcggatcgt
ggcccacgtcgcgatggcgatggtggccgtggcccccgtcgtgatggcggtggcggtgat
cgtggtccacgtcgcgaaggcggcccccgttcggatggcggcgatcgtgctccccgtgca
gagggcgaccgcgctccccgcgccgagggtggcgatcgcgctccccgtggcgaaggcggt
tacggtggcggtcgtgccaagcaggacgatgataacggtcccgcaccagagttcgctcct
gcgtttctgacccgcgaggattaa
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integrated database retrieval system
