Sphingomonas paeninsulae: D3Y57_18730
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Entry
D3Y57_18730 CDS
T05706
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03420
Nucleotide excision repair
spha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D3Y57_18730
03430 Mismatch repair
D3Y57_18730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_18730
Enzymes [BR:
spha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3Y57_18730
DNA repair and recombination proteins [BR:
spha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3Y57_18730
MMR (mismatch excision repair)
Other MMR factors
D3Y57_18730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
T2SSF
Motif
Other DBs
NCBI-ProteinID:
AYJ87580
UniProt:
A0A494TE89
LinkDB
All DBs
Position
complement(2710535..2712808)
Genome browser
AA seq
757 aa
AA seq
DB search
MSLPAPTEQDPPYLRGLNAPQREAVLTTDGPVLVLAGAGTGKTAALTARLAHLLHTRKAY
PSEILSVTFTNKAAREMRERVGRLVGDTVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRVIKQLIRAAELDEKRWTARALAGLIDQWKNKGLLPRDIDAGESERFANGRG
GELYAQYQARLLALNACDFGDLLLHVLTILKGNRDVLENYQNRFRYIMVDEYQDTNSSQY
LWLRLLAQTRKNICCVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTPHIL
AAASGVIANNSGRLGKTLFTELPDGDKVQVIGVWDGPEEARRVGDEVDSWQRAGNSLDTI
AILVRAQFQTREFEDRFIAIGLPYKIVGGFRFYERAEIRDALAYLRLVNQPSDDLALERI
VNVPKRGLGDKAVAKVQQLARAAYVPLSTAAAMILDTDELTPQARRALGNLVGDIARWRD
MAGSMSHPDLARQVFDESGYTAMLQADRSAEAAGRLENMAELVRAMEEYENLGAFLEHVS
LVMDNDAQRDTEKVTIMTIHAAKGLEYEKVFLVGWEEGVFPSQRALDEGGLASLEEERRL
AYVAITRARRSATILHAANRRIYGQWTSSIPSRFVGELPDANVDSETTMSGGASLWQANW
SDRTDPFANVARGTGRGPGWQRANAGGFSVSPTRIVEARGSAVSLGNKGRGDVSVGMRVF
HTKFGYGLIAEIEGNKLEIDFEVAGRKRVLDSFISPS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcccgcgccaaccgaacaagacccgccgtatctgcggggactgaatgccccg
caacgtgaagctgtgctgacgaccgatgggccagtgcttgttctcgcgggtgcaggcacc
ggcaagaccgccgccctgactgcgcggctcgcgcatctgcttcacacgcgcaaagcctat
ccttccgaaatcctgagcgtcactttcaccaacaaggccgcccgcgaaatgcgcgaacgt
gtcgggcgactggtcggagatacggtcgaggggatgccgtggctcggtacgtttcacgcc
atcgccgcaaagatgttgcgtcgccatgccgaactggttgggctgcaatcaaacttcacg
atcctcgataccgacgatcaattacgcgtgataaagcagttgatccgggctgcggaactc
gatgaaaaacgctggaccgcgcgggcactcgccgggctaatcgatcagtggaagaacaaa
gggctgctccccagggacatcgacgcgggtgaatccgaacggttcgcaaatgggcgcggc
ggggaattatatgcgcaatatcaggcaaggctgctcgctctcaacgcctgcgatttcggc
gacttgctgctccacgtcctgacgattctgaagggcaatcgcgacgttctcgaaaactac
cagaaccgctttcgctacatcatggttgacgagtatcaggacaccaattcgagccaatat
ctctggctccgtttacttgcccagacccgcaagaacatttgctgcgtcggcgatgacgac
cagtcgatttactcgtggcgtggcgctcaggttgaaaatatcctgaagttcgaaaaggat
ttccccggcgcgaaggttatccgactggaacagaattaccggtcgacgccgcatatcctt
gctgcggcctccggggtgattgctaataatagcggacgcctcggcaagacgttgttcacc
gaattacccgatggagacaaggttcaggtcatcggcgtgtgggacggtcccgaagaagcc
cgccgtgtcggggatgaggtcgacagttggcagcgcgcagggaacagtctcgacaccata
gcgatcctcgtccgcgcgcagttccagacgcgtgagttcgaggatcgatttatcgctatc
ggcctgccctataaaatcgtcggcggattccgattctacgagcgcgccgaaatccgcgat
gccctcgcctatctgcgactcgtcaatcaaccaagcgatgacctcgcccttgaacgcatc
gtcaacgtccccaaacgcgggctgggcgacaaagccgtggcaaaggtccagcaactagcc
cgtgcagcctacgtgcccttgtcgaccgccgcggcgatgatcctcgacaccgatgaactg
actccgcaggcccgtcgtgcgcttggcaatctggtcggcgatatcgctcgctggcgcgac
atggcggggtcaatgtcgcatcccgacctcgcccgtcaggtcttcgacgaaagcggctac
acagcaatgctacaagccgaccgatcagccgaagctgctggtcgtctggagaatatggcc
gaactcgtccgcgcgatggaggagtatgaaaacctcggcgcgttcctcgaacatgtgtca
ctggtcatggataatgacgcacagcgggataccgaaaaagtcaccataatgacaattcac
gccgcaaaggggctggaatacgaaaaagtgttcctcgtcggctgggaagaaggcgttttc
ccatcgcagcgcgcgctcgacgaaggcggcctcgccagtctggaggaggaacgccgcctc
gcctatgtcgcgatcactcgcgcacggcggtccgcgaccatcctccacgctgccaatcgc
cgcatctacggccagtggacatccagcatcccaagccgtttcgttggtgaactcccggat
gccaacgttgattccgaaactacaatgagtggcggcgcatcgttgtggcaggcaaattgg
tccgaccgcaccgacccgtttgccaatgtcgcacgcggaaccggacgcggccccggctgg
caacgcgcgaatgccggcgggttctcggtatcgcctacccgtattgtcgaggcgcgcggt
tctgctgtcagcctcggcaacaaaggccgcggcgatgtgtcggtcggaatgcgcgtgttc
cacaccaaattcggctatggcctgatcgcagagatcgagggcaacaagcttgagatcgac
ttcgaagtggccgggcgcaagcgcgtcttggacagcttcataagtccaagctga
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