Sphingobium sp. EP60837: EP837_00028
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Entry
EP837_00028 CDS
T04432
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphb03009
]
EP837_00028 (rluD)
Enzymes [BR:
sphb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
EP837_00028 (rluD)
Ribosome biogenesis [BR:
sphb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EP837_00028 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ANI76485
UniProt:
A0A173KT08
LinkDB
All DBs
Position
1:complement(19015..19965)
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AA seq
316 aa
AA seq
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MGSGDSIIETTIGEAQHGLRLDKALADLLPELSRERLKSLIVEGQVTAQGRALNPSMKVM
AGQAFAITLPPPVEAEAVAQDIPLNIVHEDADLIVIDKPAGLVVHPAAGNLDGTLVNALL
HHCRGQLSGIGGVARPGIVHRIDKDTSGLLVVAKSDKAHEGLAQQFKAHSIDRLYAAIVY
GIPQPGAGTIDTWIGRSDSDRKKMAVHREGRGKHAITHYRVLDRLRGAALVECRLETGRT
HQVRVHMAHLGHPLIGDPVYGRDRKGFKSILETIGFKRQALHAKRLGFIHPVTGQNLSFD
SALPIDMQELLSELLV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgggggattccatcatcgaaacgacgattggcgaagcgcagcatgggcttcgg
ctcgacaaggcgctggccgacctgctgcctgagctttcgcgcgagcggttgaagagcctg
atcgtcgagggtcaggtgaccgcgcagggtcgcgcgcttaatccttcgatgaaggtcatg
gccggacaagccttcgccattaccctgccccctcctgtggaagccgaagcagtggcacag
gatattccactcaacatcgtacatgaagatgcggacctgattgtcatcgataagcctgcc
gggctggtcgtgcatcctgccgcaggcaatctggatggaacgctggtcaacgccctgctg
catcattgccggggacagctgtcgggcatcggcggcgtggcgcgtcccggcatcgtccat
cgcatcgacaaggatacttccgggcttctggtcgttgctaaatcggacaaggctcatgag
ggcctcgctcagcaattcaaagcgcatagcatcgatcgcctttatgccgcgatcgtctat
ggtataccgcagcccggcgctggcacgattgatacctggatcggccgatcggactccgac
cgcaagaagatggcggtacatcgagaaggacggggcaagcacgccatcacccattatcgc
gtcctggaccggcttcgcggcgcagcgctggtcgaatgcaggctggaaaccgggcggacg
catcaggttcgcgtgcatatggcgcatctgggccaccccttgatcggcgacccggtttac
ggtagagacagaaaaggtttcaaatcaatactggaaacgataggtttcaaaaggcaggca
ttgcacgcgaaacggctggggttcatacatccggtgacggggcaaaatctcagctttgac
agtgcactgcctatcgacatgcaggaactgttaagcgagcttctcgtatag
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