Sphingobium sp. EP60837: EP837_00145
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Entry
EP837_00145 CDS
T04432
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphb03009
]
EP837_00145 (rumA)
Enzymes [BR:
sphb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EP837_00145 (rumA)
Ribosome biogenesis [BR:
sphb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EP837_00145 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
MTS
Motif
Other DBs
NCBI-ProteinID:
ANI76600
UniProt:
A0A173KSE8
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All DBs
Position
1:157864..159072
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AA seq
402 aa
AA seq
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MTEIDTDIIVRIAAKGDGVTSDGRHVQLAAPGDRLTGDGRLLPGPHHITPPCMHFPACGG
CELQHVDEESFAAFATARVTGPLAGQGITAETVLPAHVSPPRTRRRASLRAAREGRRIVI
GFAESGSHKLIDIAMCEILDPRLFALVQPLREVLPLILPDRRAAHVRMSLVDQGVDLLLE
RVRVEGLAADEALRDFADTWKLARLTIDEGDGQQVRWEPEPVTVSFGGVAVGFPSFAFLQ
ATPDGEAALVEFVREALPGRGAVADLFCGLGTFALAIGEGRPVYAAEGARDLVLSLKLAA
NRAQRRMVVDHRDLFRKPLTPEELNRFAAVVIDPPRAGAREQVMQLAASAVPLIAYVSCN
PASFARDAAHLVAGGYVLESVKPVGQFRWSTHVELAATFRRR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagatcgacacagatattatcgtccgtatcgccgccaaaggcgacggcgtgacc
tccgacggccggcatgtgcagttggcagcaccgggtgaccggctgacgggggatggtcgg
ctcttgcccggcccgcatcatatcacgccgccttgcatgcactttccggcatgtggtgga
tgcgaacttcagcatgtcgatgaggagagctttgctgccttcgcaacggcgcgtgttacc
ggcccgttggcgggccagggcattacggctgagacggtgctacccgcacatgtctcgcca
cccagaacccgccgccgggcttcgttgcgggctgcgcgcgaggggcggcggatcgtcatc
ggcttcgctgagtcgggcagccacaagctgattgatatcgccatgtgcgagatattggac
ccgcggctttttgcgctggtgcagccgcttcgcgaggtgctgcccctgatcctgccggac
aggcgtgcggcgcatgtccgcatgtccctggttgatcagggtgtcgatctgctgctcgag
agggtccgcgtcgaagggcttgcggcggacgaggcgctgcgggactttgcggacacctgg
aagctggcgcggctgaccatagatgagggcgatgggcagcaggtgcgctgggagcctgag
cctgtgacggtaagtttcgggggcgtggccgtgggcttcccctccttcgcgttccttcag
gcgacgccggatggggaggcggcgctggtggagtttgtccgtgaagctttgcctgggcgg
ggagcggtggccgatctcttctgtggtcttggcacctttgcgctggcgatcggtgagggg
cggcccgtctatgctgccgaaggtgcgcgcgatttggtcctgtcgctgaagctcgcggct
aaccgtgcacagcggcggatggtggtggatcatcgagacctgttcaggaagccgctgacg
cccgaggagctaaatagatttgctgccgtggtgatcgacccgccccgggcgggtgcgcgg
gagcaggtcatgcagttggcggcgtcggctgtgcccctgatcgcctatgtatcgtgcaat
ccggcgagctttgcgcgggatgcggcgcatctggtcgctggcggctatgtgctggagagc
gtcaagccggtggggcagttccgatggtcaacgcatgtcgaactggctgcgactttccgg
cggagatga
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