Sphingobium sp. EP60837: EP837_00197
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Entry
EP837_00197 CDS
T04432
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_00197
Enzymes [BR:
sphb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP837_00197
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EP837_00197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ANI76651
UniProt:
A0A173KRS7
LinkDB
All DBs
Position
1:216839..219814
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AA seq
991 aa
AA seq
DB search
MGDRTRPALFNIPAHRAFSDALAAGIIAQHGGDAMALAQGMILLPTNRAIRAVSDAFVRR
SGGGLLLPRLVAIGDPDLGEQAGGALDPLGEGEAIPPAIAPMRRQMILARMVQQASSPPI
DAAQAIKLGQALGAVLDQMQVERVPVTALGDLSLSDELSGHWQRSLDLFSILIRRWPEEL
ARLGLIDLADRRNRLFDRLAARWGEESPSGFVIAAGIATTAPAVASLLRQIAILPRGSVV
FAGLDQEMDDVAWDAIGPYPADPITGRAPAGHESHPQYALKRLLDRMSATRDDVALWRWG
SEHDARAVRNRNISNAMLPPRLTSRWRDLKTADRSLAGVEALEVATPGEEAQAIAIALRE
AIETPGRTAALVTPDRQLATRVSAHLARWGIAADDSAGLPLSRLPPGTLLIALAEAVAER
FAPVAMLTLLKHPLVMRGDQRLPWLEGVRGLDLLLRGPRPPAGLQGIDILLAAREGEDRQ
RNLRAQVLQWWQTARALLLPLEQVFTTAPSFSAQLAAIREQAGILTGDAVWSGVQGRAAA
DLFAEMEQAAAEGPQQADVRSLPTLLDHMLGGLSIRPVQGGHPRIAILGLIEAQLVQADV
MILGGLNEGTWPGLPSPDPWLAPRIRRELGLPGLESRIGRAAHDFASALGAPHVLITRAR
RGTGGPAVASRFWLRLKAMAGPQWKSADRYAALAQALDRPTSHKPSRRPAPVPPGSVRPK
LIAVTDVDRLKADPYAFYAKRILRLNRLDPIDADAGPAWRGTAVHEILQRWAEAGRRDPA
DLEARARAMFDRPDVHPLLKALWQPRLIEAIRWIAVEVAADQAAGRTILAVETDGRADIA
GVTLTGKADRIDRMPGGSLAIVDYKTGKPPSAKQVKAGYSLQLGLLGLIAEQGGFPAIDS
AQTAGCFEYWSLAKKNDAFGYRDSPVDPMGKRDKIVTADFTSFVHARFEEVAGAYLTGQA
PFDAQVNPEVASYGDYDQLMRLEEWYGRDDG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcgcacccggcctgcgttgtttaacatcccggcgcaccgtgccttctccgac
gcgctggccgcaggcatcatcgcccagcatgggggcgacgccatggctttggcacagggc
atgatcctgctgccgaccaaccgcgccatccgcgcggtcagcgacgcctttgtccgccgg
tcaggcggtggattgctgctgccgcgactggtcgcgatcggtgatccggacctgggagag
caggccggcggggcgctcgatccgctgggcgagggggaagcgatcccgcccgcgatcgcg
ccgatgcggcggcaaatgatcctggcccgtatggtgcagcaggcgtccagcccgcccatc
gatgcggcccaggcgatcaagctcggacaggcgctcggcgccgtgctcgaccagatgcag
gtggagcgggtgcccgtcacggcgctcggcgatctgtccctttccgacgagctttccggc
cactggcagcgatcgctcgatctcttttccatcctcatccgtcgctggccggaggaactt
gcccggctcggcctcatcgaccttgccgatcggcgcaatcgcttatttgatcgactggct
gcgcgctggggcgaggagtcgccgtctggcttcgtcatcgccgcagggattgcgacaaca
gcgcccgccgtcgccagcctcctccggcagatcgcaattctgccgcgcggcagtgtcgtg
ttcgccgggctggatcaggaaatggacgatgtggcctgggacgcgatcggcccataccca
gcggacccgatcacaggccgtgccccggcagggcatgaaagccacccccaatatgccctg
aagcgtctgctcgaccggatgagcgcgacgcgcgacgatgtggcgctgtggcgctggggc
agcgagcatgacgcgcgggcagtccgcaaccgcaacatctcgaacgcgatgttgcctccc
cgcctcaccagccgctggcgcgatctcaagacggccgaccgttcgctcgctggggtggag
gcgctggaagtggcgacacccggtgaggaagcgcaggcaatcgctatagcgttgcgcgaa
gccatcgagacgccgggccgcaccgcagccttggtcacccccgaccgtcaactcgcgact
cgtgtctccgcccacctggcgcgatggggcatcgcggccgatgattccgctggtctgcca
ctgtcgcgcctgccgcccggcacgttgctcatcgctcttgccgaagcggtggcggaacgc
ttcgcgcccgttgccatgctgacattgctgaaacatccgctggtgatgcgcggcgatcag
cgtttgccttggctggagggcgtgcgcgggctggatttattgctccgcggtccgcgtcct
cccgctggactccaaggcatcgacattttgctcgccgcgcgggagggagaggaccgccag
cgcaacctgcgcgcgcaagtgctgcaatggtggcagacagcccgcgcgctgctccttccc
ttggagcaggtcttcactaccgctccgtccttctcggctcaactcgccgcgatccgggag
caggccgggatattgaccggcgacgcagtctggtcgggcgtccagggccgcgccgccgcc
gatcttttcgccgaaatggagcaggccgccgctgaagggccgcagcaggcagatgtccgc
tcgctcccgaccctcctcgaccatatgctcggcggcctgtccatccgtccggtgcaaggc
ggccatccccgtatcgccatcttgggtctcatcgaggcgcagcttgtgcaggctgacgtc
atgatcctggggggcctcaacgaaggcacttggcctggcctgccatcgcccgacccctgg
ctcgctccccggatcaggcgggagcttggccttccggggcttgagagccgtatcgggcgc
gctgcccatgactttgcgagcgcgctcggcgctccccatgtcctcatcacccgcgccaga
agaggtacgggaggacctgctgtcgcctcccgcttctggctgcggctaaaggccatggcg
gggcctcagtggaagagcgcggaccgctacgccgcgctcgcgcaggcgctcgaccgtcca
accagccacaagcccagccgccgtccggcgccagttccgcccgggtccgtccgcccaaag
ctgatcgccgtcaccgacgtcgatcgcctgaaagcggatccctacgccttctacgccaag
cgcatcctgcggctgaaccgcctcgatccgatcgatgccgacgcggggccggcatggcgg
ggcacagccgttcatgaaattctccagcggtgggccgaggctgggcgtcgcgacccggct
gatcttgaagctcgtgcccgcgccatgttcgaccggcccgatgttcacccgctgctcaag
gccctgtggcaaccccgtcttatcgaagcgatccgatggatcgctgtggaggtcgccgcc
gatcaggccgcgggccgcacgatcctagccgtggaaaccgacggccgcgccgatatcgct
ggcgtcaccctgacaggcaaggccgatcggatcgatcgcatgccgggcggctcgctcgcc
atcgtcgattacaagacgggcaagccccccagcgccaaacaggtgaaggcaggctattcg
ctgcaattgggcctgctcggcttgattgcggagcagggcggcttccctgcaatcgatagt
gcgcagacggcaggctgtttcgaatattggtcgctcgccaagaagaatgacgcattcggt
tatcgggacagcccggttgatccgatgggcaagcgcgacaagatcgtgacggccgacttc
acctccttcgtccatgcccggttcgaggaggtggctggcgcttatctcaccggccaggct
cccttcgacgcgcaggtaaatcctgaagtggccagctatggcgattatgaccagttgatg
cggctggaagaatggtatgggcgcgacgatggctag
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